RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 A0A1W2PPE3 182 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 C17orf98A8MV24 154 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 BOLA2-SMG1P6H3BVE0 249 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 GOSR2O14653 212 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 SLC22A5O76082 557 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 LMO4P61968 165 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 TMEM187Q14656 261 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 LY6G6FQ5SQ64 297 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 CLEC2AQ6UVW9 174 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 KCTD9Q7L273 389 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 GLYATL2Q8WU03 294 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 PIMREGQ9BSJ6 248 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 ABHD14AQ9BUJ0 271 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 KCNIP3Q9Y2W7 256 aa15.27■□□□□ 0.03
CLN3-206ENST00000360019 A0A0B4J2A0 478 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 NDUFS8O00217 210 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 ITGB1BP1O14713 200 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 SIX6O95475 246 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 H2BFSP57053 126 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 COQ8AQ8NI60 647 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 FAM216AQ8WUB2 273 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 ZNF436Q9C0F3 470 aaPredicted RBP15.26■□□□□ 0.03
CLN3-206ENST00000360019 SDHAF2Q9NX18 166 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 SHPKQ9UHJ6 478 aa15.26■□□□□ 0.03
CLN3-206ENST00000360019 KIAA1324LA8MWY0 1029 aaPredicted RBP15.25■□□□□ 0.03
CLN3-206ENST00000360019 ANXA3P12429 323 aa15.25■□□□□ 0.03
CLN3-206ENST00000360019 ZFP36P26651 326 aaKnown RBP15.25■□□□□ 0.03
CLN3-206ENST00000360019 GNG10P50151 68 aa15.25■□□□□ 0.03
CLN3-206ENST00000360019 EIF4EBP1Q13541 118 aaPredicted RBP15.25■□□□□ 0.03
CLN3-206ENST00000360019 MSMO1Q15800 293 aa15.25■□□□□ 0.03
CLN3-206ENST00000360019 PPP1R14BQ96C90 147 aa15.25■□□□□ 0.03
CLN3-206ENST00000360019 MSI2Q96DH6 328 aaKnown RBP15.25■□□□□ 0.03
CLN3-206ENST00000360019 WDR89Q96FK6 387 aaPredicted RBP15.25■□□□□ 0.03
CLN3-206ENST00000360019 LOC105371242A0A075B767 164 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 IGHV4-30-2A0A087WSY4 118 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 CCSO14618 274 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 PROP1O75360 226 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 HNRNPCP07910 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLN3-206ENST00000360019 IGHV1-8P0DP01 117 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 F2RP25116 425 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 S100GP29377 79 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 DCAF12L2Q5VW00 463 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 ZBTB34Q8NCN2 500 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 OR51H1Q8NH63 302 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 DMRTB1Q96MA1 342 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 SUCNR1Q9BXA5 334 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 PIPOXQ9P0Z9 390 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 LIPFP07098 398 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 HLA-GP17693 338 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 BTNL3Q6UXE8 466 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 LIAT1Q6ZQX7 453 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 TCTE3Q8IZS6 198 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 OR5M8Q8NGP6 311 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 LHFPL5Q8TAF8 219 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 CHIAQ9BZP6 476 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 ZNRD1Q9P1U0 126 aa15.24■□□□□ 0.03
CLN3-206ENST00000360019 A0A087X0M5 115 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 IGHV4-61A0A0C4DH41 118 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 A0A1B0GX30 115 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 A0A1W2PPH5 198 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 H0Y980 276 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 ADAP1O75689 374 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 GPR12P47775 334 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 RAB7AP51149 207 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 C11orf91Q3C1V1 193 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 Q3ZCU0 254 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 C1orf229Q6ZS94 237 aaPredicted RBP15.23■□□□□ 0.03
CLN3-206ENST00000360019 SLC25A48Q6ZT89 311 aaKnown RBP15.23■□□□□ 0.03
CLN3-206ENST00000360019 ODF3L1Q8IXM7 274 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 TMEM222Q9H0R3 208 aa15.23■□□□□ 0.03
CLN3-206ENST00000360019 SMLR1H3BR10 107 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 OR2A4O95047 310 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 DLX1P56177 255 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 RPL30P62888 115 aaKnown RBP15.22■□□□□ 0.03
CLN3-206ENST00000360019 RAB39BQ96DA2 213 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 OR2A7Q96R45 310 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 ONECUT1Q9UBC0 465 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 SESN1Q9Y6P5 492 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 A8MXK9 166 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 RBP4P02753 201 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 UCP1P25874 307 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 LINC00205P59089 165 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 RPL39P5Q59GN2 51 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 LRTM2Q8N967 370 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 RAB18Q9NP72 206 aa15.22■□□□□ 0.03
CLN3-206ENST00000360019 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 SAA2-SAA4A0A096LPE2 208 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 MPTX1A8MV57 137 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 HOXB5P09067 269 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 GIPP09681 153 aaPredicted RBP15.21■□□□□ 0.03
CLN3-206ENST00000360019 SAA2P0DJI9 122 aaPredicted RBP15.21■□□□□ 0.03
CLN3-206ENST00000360019 LCN2P80188 198 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 PAX2Q02962 417 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 LYG1Q8N1E2 194 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 Q8N7P7 452 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 TMEM56Q96MV1 263 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 ZNF251Q9BRH9 671 aa15.21■□□□□ 0.03
CLN3-206ENST00000360019 TMEM133Q9H2Q1 129 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms