RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SMIM21Q3B7S5 101 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 MYPOPQ86VE0 399 aaPredicted RBP10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 FER1L6-AS2Q96M78 137 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 TCFL5Q9UL49 500 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 LRRC3CA6NJW4 275 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 FCN1O00602 326 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 IRF2P14316 349 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 CRISP2P16562 243 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 CORO2AQ92828 525 aa10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 WDR61Q9GZS3 305 aaKnown RBP10.91□□□□□ -0.66
DNMT3A-202ENST00000321117 PDE6DO43924 150 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 COX6A1P12074 109 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 CRYGSP22914 178 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 CDCP2Q5VXM1 449 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 TDHQ8IZJ6 230 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 SGMS2Q8NHU3 365 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 ZBTB34Q8NCN2 500 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 DNASE2BQ8WZ79 361 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 EGLN1Q9GZT9 426 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 SLC31A2O15432 143 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 RNF224P0DH78 156 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 FGF5P12034 268 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 SSPNQ14714 243 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 VHLLQ6RSH7 139 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 DDA1Q9BW61 102 aa10.9□□□□□ -0.66
DNMT3A-202ENST00000321117 ACTL6BO94805 426 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 LTBRP36941 435 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 PTGDSP41222 190 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 THBS3P49746 956 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 SUMO1P63165 101 aaKnown RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 HIST3H3Q16695 136 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 TMEM178AQ8NBL3 297 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 NAT8BQ9UHF3 227 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 HAND1O96004 215 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 OR10J1P30954 320 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 SRP14P37108 136 aaKnown RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 TNFRSF9Q07011 255 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 KIAA1324LA8MWY0 1029 aaPredicted RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 SPINK4O60575 86 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 IGHV2-5P01817 119 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 PAX5Q02548 391 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 C3AR1Q16581 482 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 LRRC75BQ2VPJ9 315 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 CISD2Q8N5K1 135 aaKnown RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 R3HDM4Q96D70 268 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 DNAJC13O75165 2243 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 AQP7O14520 342 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 SOD3P08294 240 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 COL10A1Q03692 680 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 ZNF439Q8NDP4 499 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 OR4X1Q8NH49 305 aa10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
DNMT3A-202ENST00000321117 HSBP1L1C9JCN9 74 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 NDUFB4O95168 129 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 MPLP40238 635 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 ZIC4Q8N9L1 334 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 TBX15Q96SF7 602 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 MSL2Q9HCI7 577 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 SLC35D1Q9NTN3 355 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 ZDBF2Q9HCK1 2354 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 KIAA2026Q5HYC2 2103 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 OOEPA6NGQ2 149 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 OR2H2O95918 312 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 PMCHP20382 165 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 MAGEA5P43359 124 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 TAS2R45P59539 299 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 RHOBP62745 196 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 ZNF718Q3SXZ3 478 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 C22orf15Q8WYQ4 148 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 LIME1Q9H400 295 aa10.88□□□□□ -0.67
DNMT3A-202ENST00000321117 DIDO1Q9BTC0 2240 aaKnown RBP10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 WFIKKN1Q96NZ8 548 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 C1QTNF5Q9BXJ0 243 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 TINAGQ9UJW2 476 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 RFPL3SP0C7P2 107 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 RTP5Q14D33 572 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 CT55Q8WUE5 264 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 SSMEM1Q8WWF3 244 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 ARL3P36405 182 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 DRAM1Q8N682 238 aa10.87□□□□□ -0.67
DNMT3A-202ENST00000321117 PKIBQ9C010 78 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms