RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 GRXCR1A8MXD5 290 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A5PA8MXJ8 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A23PA8MXZ1 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C1QTNF9BB2RNN3 333 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C17orf112F2Z3M2 114 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 DNPH1O43598 174 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 TNFP01375 233 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A15PP0C7V4 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A13PP0C7W8 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A14PP0C7W9 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A24PP0C7X0 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 AMTP48728 403 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 CTXN1P60606 82 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 AESQ08117 197 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 Q0VG73 95 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 DEFB134Q4QY38 66 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C1QL3Q5VWW1 255 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 DGAT2L6Q6ZPD8 337 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 OR4A5Q8NH83 315 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 RAB1CQ92928 201 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 PRTFDC1Q9NRG1 225 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 ARID1AO14497 2285 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 NPIPA5E9PKD4 350 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 F2Z2F3 143 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 NPIPA3F8WFD2 350 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 H2BFMP0C1H6 154 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 RELBQ01201 579 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 CD226Q15762 336 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 ADIPOQQ15848 244 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C10orf128Q5T292 105 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 OR2M3Q8NG83 312 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 VN1R1Q9GZP7 353 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FNDC4Q9H6D8 234 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-201ENST00000316433 ALKBH4Q9NXW9 302 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 NPIPA1Q9UND3 350 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 PCNTO95613 3336 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 K7EP34 96 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 P2RY10O00398 339 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 ST8SIA3O43173 380 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF207O43670 478 aaKnown RBP5.67□□□□□ -1.5
ZNF540-201ENST00000316433 BNIP3LO60238 219 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 UTS2O95399 124 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 IFNA1P01562 189 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 HPNP05981 417 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 CELA3BP08861 270 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 SLC25A6P12236 298 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 IGLL1P15814 213 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 RUNX1Q01196 453 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 LCN15Q6UWW0 184 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 HARBI1Q96MB7 349 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 PLEKHF2Q9H8W4 249 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM74BQ9NUR3 256 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 MRPL16Q9NX20 251 aaKnown RBP5.67□□□□□ -1.5
ZNF540-201ENST00000316433 WNT16Q9UBV4 365 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 CEP192Q8TEP8 1941 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 DCDC2BA2VCK2 349 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 FBLL1A6NHQ2 334 aaKnown RBP5.67□□□□□ -1.5
ZNF540-201ENST00000316433 DKK1O94907 266 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 S1PR2O95136 353 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 CLDN1O95832 211 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 CGAP01215 116 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 GYPAP02724 150 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 NPBWR2P48146 333 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF121P58317 390 aaPredicted RBP5.67□□□□□ -1.5
ZNF540-201ENST00000316433 RPL32P62910 135 aaKnown RBP5.67□□□□□ -1.5
ZNF540-201ENST00000316433 PLCXD2Q0VAA5 305 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 UNC119Q13432 240 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 GABRA6Q16445 453 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM240Q5SV17 173 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 LGI3Q8N145 548 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 FAM58AQ8N1B3 248 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 OR4N2Q8NGD1 307 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 OR2I1PQ8NGU4 316 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 KCNG3Q8TAE7 436 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM171Q8WVE6 324 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 ELOVL3Q9HB03 270 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 CENPMQ9NSP4 180 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 STARD5Q9NSY2 213 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 NUMA1Q14980 2115 aa5.67□□□□□ -1.5
ZNF540-201ENST00000316433 TEX48A0A1B0GUV7 120 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 C7orf71A4D174 169 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 EML2O95834 649 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 NRASP01111 189 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 KRASP01116 189 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 REG1AP05451 166 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 GPM6AP51674 278 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ATP5J2P56134 94 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 CLDN2P57739 230 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 RPL24P83731 157 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 IGFBP7Q16270 282 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 NRN1LQ496H8 165 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 COX19Q49B96 90 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SPATA31B1PQ5VZV4 182 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms