RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.28
LEMD3-201ENST00000308330 IAPPP10997 89 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 DYNLT3P51808 116 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 TAS2R45P59539 299 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 GAGE2BQ13066 116 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 GAGE2EQ4V326 116 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 RAB9BQ9NP90 201 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 GPR84Q9NQS5 396 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 GAGE2DQ9UEU5 116 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 PPIAL4EA0A075B759 164 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 ZIC2O95409 532 aaPredicted RBP13.33□□□□□ -0.28
LEMD3-201ENST00000308330 SRP19P09132 144 aaKnown RBP13.33□□□□□ -0.28
LEMD3-201ENST00000308330 PPIAL4FP0DN26 164 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
LEMD3-201ENST00000308330 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
LEMD3-201ENST00000308330 PPIAL4AQ9Y536 164 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 ATP23Q9Y6H3 246 aa13.33□□□□□ -0.28
LEMD3-201ENST00000308330 UBE2L5PA0A1B0GUS4 154 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 CDKN2AP42771 156 aaKnown RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 PLGLAQ15195 96 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 PRSS3P2Q8NHM4 247 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 OXGR1Q96P68 337 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 MRPS18AQ9NVS2 196 aaKnown RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 TMEM38BQ9NVV0 291 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SLC25A6P12236 298 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 NMUP48645 174 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 CAMPP49913 170 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 RAE1P78406 368 aaKnown RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 ACSF3Q4G176 576 aaPredicted RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 CLDN23Q96B33 292 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SERTM1A2A2V5 107 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 ZNF133P52736 654 aaPredicted RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SRSF4Q08170 494 aaKnown RBP13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SPINK14Q6IE38 97 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SLC5A6Q9Y289 635 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 LOC107984156A0A0G2JMH3 177 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 CSN1S1P47710 185 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 ARL17AQ8IVW1 177 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
LEMD3-201ENST00000308330 KLF4O43474 513 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 CEACAM3P40198 252 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 GVQW1Q8N7I0 195 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 WDYHV1Q96HA8 205 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 TRBV24-1A0A075B6N3 115 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
LEMD3-201ENST00000308330 HARBI1Q96MB7 349 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 EGLN1Q9GZT9 426 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 GRPP07492 148 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 IL6RP08887 468 aaPredicted RBP13.31□□□□□ -0.28
LEMD3-201ENST00000308330 FAM157BP0CG42 384 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 PSMB2P49721 201 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 GAGE5Q13069 117 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 GAGE6Q13070 117 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 TRAV9-2A0A087WT02 112 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 FCGR3AP08637 254 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 GPR183P32249 361 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 ZIC1Q15915 447 aa13.31□□□□□ -0.28
LEMD3-201ENST00000308330 SSBP4Q9BWG4 385 aaPredicted RBP13.31□□□□□ -0.28
LEMD3-201ENST00000308330 IGHV3-64DA0A0J9YX35 117 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 K7EP13 123 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 MPPED1O15442 326 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 OR5AS1Q8N127 324 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 KISS1RQ969F8 398 aaPredicted RBP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 PTX4Q96A99 478 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 SPSB1Q96BD6 273 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 AHRRA9YTQ3 701 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 CT62P0C5K7 136 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 RPS27P42677 84 aaKnown RBP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 RBX1P62877 108 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 FMODQ06828 376 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 ZNF562Q6V9R5 426 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 SARGQ9BW04 601 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 NRN1Q9NPD7 142 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 CISD1Q9NZ45 108 aaKnown RBP13.3□□□□□ -0.28
LEMD3-201ENST00000308330 LEPROTL1O95214 131 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 C1QCP02747 245 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
LEMD3-201ENST00000308330 KBTBD11-OT1A0A1B0GTJ5 212 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 A1L4Q6 167 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 SERF1AO75920 110 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 SEC11AP67812 179 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 MEF2BQ02080 365 aaPredicted RBP13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR8B8Q15620 311 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR52N5Q8NH56 324 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 RASL10BQ96S79 203 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 MMP25Q9NPA2 562 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 A0A1W2PPV9 198 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms