RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ADIPOR1Q96A54 375 aa13.34□□□□□ -0.27
FNDC1-201ENST00000297267 METTL1Q9UBP6 276 aaKnown RBP13.34□□□□□ -0.27
FNDC1-201ENST00000297267 TNFSF18Q9UNG2 199 aa13.34□□□□□ -0.27
FNDC1-201ENST00000297267 DEDDO75618 318 aa13.34□□□□□ -0.27
FNDC1-201ENST00000297267 HIST1H1BP16401 226 aaKnown RBP13.34□□□□□ -0.27
FNDC1-201ENST00000297267 ZG16O60844 167 aa13.33□□□□□ -0.27
FNDC1-201ENST00000297267 LOXL3P58215 753 aa13.33□□□□□ -0.27
FNDC1-201ENST00000297267 RNF133Q8WVZ7 376 aa13.33□□□□□ -0.27
FNDC1-201ENST00000297267 H2BFSP57053 126 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 SRSF9Q13242 221 aaKnown RBP eCLIP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 ZXDCQ2QGD7 858 aaPredicted RBP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 HSPB9Q9BQS6 159 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 BET1LQ9NYM9 111 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 SPATA45Q537H7 98 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 A0A1W2PRS3 328 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 TGFAP01135 160 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 UCP2P55851 309 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 TRA2AQ13595 282 aaKnown RBP eCLIP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 SHISA5Q8N114 240 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 ABHD12Q8N2K0 398 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 ZDHHC8Q9ULC8 765 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 ARID2Q68CP9 1835 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 B4DEV8 164 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 NUDT16L1Q9BRJ7 211 aaKnown RBP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 SSBP3Q9BWW4 388 aaPredicted RBP13.33□□□□□ -0.28
FNDC1-201ENST00000297267 CHST5Q9GZS9 411 aa13.33□□□□□ -0.28
FNDC1-201ENST00000297267 DIRC3C9JPN6 131 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 GAPDHP04406 335 aaKnown RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 RPL31P62899 125 aaKnown RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 KHDC3LQ587J8 217 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 FOXJ2Q9P0K8 574 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 WISP3O95389 354 aaPredicted RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 PGA5P0DJD9 388 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 ELOBQ15370 118 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 MPC1Q9Y5U8 109 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 SPANXN1Q5VSR9 72 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 TCTEX1D1Q8N7M0 179 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 DYNLRB2Q8TF09 96 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 CIDEAO60543 219 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 OR10J1P30954 320 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 C2orf68Q2NKX9 166 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 MOB1BQ7L9L4 216 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 NYNRINQ9P2P1 1898 aaKnown RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 A0A1W2PQD3 144 aa13.32□□□□□ -0.28
FNDC1-201ENST00000297267 RPLP1P05386 114 aaKnown RBP13.32□□□□□ -0.28
FNDC1-201ENST00000297267 FCGR2BP31994 310 aaPredicted RBP13.31□□□□□ -0.28
FNDC1-201ENST00000297267 IFITM2Q01629 132 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 QTRT1Q9BXR0 403 aaKnown RBP13.31□□□□□ -0.28
FNDC1-201ENST00000297267 IGKV1D-43A0A0B4J1Z2 117 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 PITX3O75364 302 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 CXorf1O96002 111 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 TEX30Q5JUR7 227 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF818PQ6ZRF7 136 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 LINC01560Q8TB33 94 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 MESP1Q9BRJ9 268 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 HOXC4P09017 264 aaPredicted RBP13.31□□□□□ -0.28
FNDC1-201ENST00000297267 CLDN18P56856 261 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 RELBQ01201 579 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 ANAPC16Q96DE5 110 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 S1PR2O95136 353 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 LIMS1P48059 325 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 DNLZQ5SXM8 178 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 PIN1P1O15428 100 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 GALP22466 123 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 RPL39P5Q59GN2 51 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 C1QL2Q7Z5L3 287 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 HOGA1Q86XE5 327 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 SELENOHQ8IZQ5 122 aaKnown RBP13.31□□□□□ -0.28
FNDC1-201ENST00000297267 WFDC12Q8WWY7 111 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 PITPNC1Q9UKF7 332 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 LHFPL6Q9Y693 200 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
FNDC1-201ENST00000297267 PROB1E7EW31 1015 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 MOSP00540 346 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 LSM6P62312 80 aaKnown RBP13.3□□□□□ -0.28
FNDC1-201ENST00000297267 SGMS2Q8NHU3 365 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 SLC25A38Q96DW6 304 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 HIGD1AQ9Y241 93 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 PSME4Q14997 1843 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 SOD3P08294 240 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 GLIPR1P48060 266 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 KIR3DL3Q8N743 410 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 A1L4Q6 167 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms