RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RBM7Q9Y580 266 aaKnown RBP15.49■□□□□ 0.07
PDLIM3-202ENST00000284770 ITPR2Q14571 2701 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 A0A087X0M5 115 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 A0A1B0GX30 115 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 CRYM-AS1A6NIL9 109 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 SFT2D2O95562 160 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 DUS4LO95620 317 aaKnown RBP15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 VAMP1P23763 118 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 PIGPP57054 158 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 Q3ZCU0 254 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 C12orf45Q8N5I9 185 aaPredicted RBP15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 FYTTD1Q96QD9 318 aaKnown RBP15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 SUCNR1Q9BXA5 334 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 LPAR2Q9HBW0 351 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 KPTNQ9Y664 436 aa15.48■□□□□ 0.07
PDLIM3-202ENST00000284770 CSMD1Q96PZ7 3565 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 HNRNPCP07910 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 C2orf68Q2NKX9 166 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 BTNL3Q6UXE8 466 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ZNF439Q8NDP4 499 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 TMEM133Q9H2Q1 129 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 METTL8Q9H825 291 aaKnown RBP15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 PSG11Q9UQ72 335 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ARHGAP32A7KAX9 2087 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 B4DSR2 109 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ABCA11PQ4W5N1 156 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 CT45A1Q5HYN5 189 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ZNF818PQ6ZRF7 136 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 WFDC11Q8NEX6 87 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 CT45A3Q8NHU0 189 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ABHD14AQ9BUJ0 271 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 CCL28Q9NRJ3 127 aa15.47■□□□□ 0.07
PDLIM3-202ENST00000284770 ST8SIA5O15466 376 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 MSMBP08118 114 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 PRTN3P24158 256 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 RAB7AP51149 207 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 DVL1P1P54792 670 aaPredicted RBP15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 PHLDA2Q53GA4 152 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 SLC25A48Q6ZT89 311 aaKnown RBP15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 C8orf31Q8N9H6 132 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 CASTOR1Q8WTX7 329 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 RTN4IP1Q8WWV3 396 aaPredicted RBP15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 MGAT4CQ9UBM8 478 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 RNF150Q9ULK6 438 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 INSIG2Q9Y5U4 225 aa15.46■□□□□ 0.07
PDLIM3-202ENST00000284770 A0A1W2PPE3 182 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 GPR31O00270 319 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 HSD17B6O14756 317 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 SLC31A2O15432 143 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 IGLV2-14P01704 120 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 CD34P28906 385 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 GNG10P50151 68 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 RND3P61587 244 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 TCTE3Q8IZS6 198 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 ABHD12Q8N2K0 398 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 ZNF645Q8N7E2 425 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 PHB2Q99623 299 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 OR2D2Q9H210 308 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 UNKLQ9H9P5 680 aaKnown RBP15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 MED13LQ71F56 2210 aa15.45■□□□□ 0.06
PDLIM3-202ENST00000284770 DBX1A6NMT0 343 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SLC22A5O76082 557 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SLC9A3R2Q15599 337 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SGPP2Q8IWX5 399 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 CMTM1Q8IZ96 169 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 MAPK1IP1LQ8NDC0 245 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 BVESQ8NE79 360 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 OR9G1Q8NH87 305 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 GALNT14Q96FL9 552 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 ABHD14BQ96IU4 210 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 AKR1E2Q96JD6 320 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SIRPDQ9H106 197 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 IFI27L2Q9H2X8 130 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 NAA60Q9H7X0 242 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 KCNS2Q9ULS6 477 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 IGHV2-26A0A0B4J1V2 119 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 A0A0B4J2A0 478 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 TEX13DA0A0J9YY54 714 aaPredicted RBP15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 J3QR06 171 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 DLX1P56177 255 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 PAX8Q06710 450 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 MSMO1Q15800 293 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 ANKRD55Q3KP44 614 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 LIN54Q6MZP7 749 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 LINC01356Q8N9X3 169 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 CCDC71LQ8N9Z2 235 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 ZNF596Q8TC21 504 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 ZNF436Q9C0F3 470 aaPredicted RBP15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SIRT7Q9NRC8 400 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 SHPKQ9UHJ6 478 aa15.44■□□□□ 0.06
PDLIM3-202ENST00000284770 IFNA2P01563 188 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 ANXA3P12429 323 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 MMP9P14780 707 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 VMO1Q7Z5L0 202 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 LINC00311Q8N616 119 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 DRAM1Q8N682 238 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 ZBTB34Q8NCN2 500 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 OR13D1Q8NGV5 346 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 CLEC7AQ9BXN2 247 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms