RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 BAXQ07812 192 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 ARL16Q0P5N6 197 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 KISS1Q15726 138 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 HAPLN4Q86UW8 402 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 ZIC4Q8N9L1 334 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 WNT16Q9UBV4 365 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 IGHV2-26A0A0B4J1V2 119 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 E9PLN8 166 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 IFNA5P01569 189 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 FBLP22087 321 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 TLE3Q04726 772 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 AMMECR1LQ6DCA0 310 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 LCN12Q6JVE5 192 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 DTX1Q86Y01 620 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 RPP25LQ8N5L8 163 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 C3orf85A0A1B0GTC6 90 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 GPX1P07203 203 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 DEFA4P12838 97 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 GLB1P16278 677 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 GTF3C1Q12789 2109 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 SMIM21Q3B7S5 101 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 PLXDC1Q8IUK5 500 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 OR8B12Q8NGG6 310 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 SSC4DQ8WTU2 575 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 DERL1Q9BUN8 251 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 FGF21Q9NSA1 209 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 MRPS16Q9Y3D3 137 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-201ENST00000273062 K7ERU9 68 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 TAX1BP3O14907 124 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 IFNA1P01562 189 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 RSPO4Q2I0M5 234 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 CHRNA10Q9GZZ6 450 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 SLC25A22Q9H936 323 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 ERRFI1Q9UJM3 462 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 GAGE12BA1L429 117 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■□□ 19.2
CTDSP1-201ENST00000273062 PMCHP20382 165 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 CXCL12P48061 93 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 NIT1Q86X76 327 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
CTDSP1-201ENST00000273062 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 G3V3Y1 287 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 CORTO00230 105 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 YPEL3P61236 119 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 ID3Q02535 119 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 ZNF695Q8IW36 515 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 TMEM234Q8WY98 164 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 OR5P3Q8WZ94 311 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 TMEM250H0YL14 139 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 NHLH1Q02575 133 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 SGCBQ16585 318 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 NEUROG1Q92886 237 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 LRFN3Q9BTN0 628 aa13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 MRPL18Q9H0U6 180 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-201ENST00000273062 C22orf46C9J442 243 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 NDUFS8O00217 210 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 MPPED1O15442 326 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 MLNRO43193 412 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 NPBWR2P48146 333 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 AMTP48728 403 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 ARG2P78540 354 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 Q6ZPA2 131 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 SELENOHQ8IZQ5 122 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 C11orf40Q8WZ69 217 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 MED29Q9NX70 200 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 TAAR3PQ9P1P4 343 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 CACNA1EQ15878 2313 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 A0A1B0GX78 115 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 PGCP20142 388 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 IL12BP29460 328 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 RELBQ01201 579 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 SCGB1C1Q8TD33 95 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 TM2D1Q9BX74 207 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 SLC39A9Q9NUM3 307 aa13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 UBE2J1Q9Y385 318 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-201ENST00000273062 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 NUDT14O95848 222 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 CRYAAP02489 173 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 OR52L2PQ8NGH6 319 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms