RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 SDSLQ96GA7 329 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TBX15Q96SF7 602 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PCGF1Q9BSM1 259 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR51B6Q9H340 312 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GJE1A6NN92 205 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 IGLV3-1P01715 115 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TAS2R30P59541 319 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PIGYQ3MUY2 71 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C22orf15Q8WYQ4 148 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR2J1Q9GZK6 312 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TMEM222Q9H0R3 208 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PTPRQQ9UMZ3 2332 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF716A6NP11 495 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF787Q6DD87 383 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C16orf82Q7Z2V1 217 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TMEM170AQ8WVE7 144 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 H3BP45 60 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 KLK10O43240 276 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CHST1O43916 411 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF32P17041 273 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR10J1P30954 320 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ADIRFQ15847 76 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C3AR1Q16581 482 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SPIN3Q5JUX0 258 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FAM180AQ6UWF9 173 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 Q6ZPA2 131 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C11orf42Q8N5U0 333 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR2V1Q8NHB1 315 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ATP5SQ99766 215 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SCNM1Q9BWG6 230 aa13.59□□□□□ -0.23
MAP1LC3B-201ENST00000268607 A0A1W2PPQ1 181 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 MAGEA5P43359 124 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CEACAM16Q2WEN9 425 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FAM27BQ5VT28 67 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PYGO2Q9BRQ0 406 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 RSG1Q9BU20 258 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF286AQ9HBT8 521 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 RPRMQ9NS64 109 aa13.58□□□□□ -0.23
MAP1LC3B-201ENST00000268607 IGKV1-27A0A075B6S5 117 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 A0A1B0GUS0 222 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PPYP01298 95 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CTSSP25774 331 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TLE1Q04724 770 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SSX7Q7RTT5 188 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SELENOHQ8IZQ5 122 aaKnown RBP13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 KIAA2026Q5HYC2 2103 aa13.58□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CEBPZOSA8MTT3 80 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 UCP3P55916 312 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MRPS34P82930 218 aaKnown RBP13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 DPPA3Q6W0C5 159 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SPTSSAQ969W0 71 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZFP30Q9Y2G7 519 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 KALRNO60229 2985 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GNRHRP30968 328 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 BAXQ07812 192 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 FOXL2NBQ6ZUU3 175 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 KCNE4Q8WWG9 221 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 A0A0U1RQV5 110 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GALR1P47211 349 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ARG2P78540 354 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM256Q8N2U0 113 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SF3B5Q9BWJ5 86 aaKnown RBP13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF552Q9H707 407 aaPredicted RBP13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PPIAL4AQ9Y536 164 aa13.57□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RAB7AP51149 207 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RTP5Q14D33 572 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 BATF2Q8N1L9 274 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 EXTL1Q92935 676 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 FOXB1Q99853 325 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM56-RWDD3S4R434 201 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 NUPR1O60356 82 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PAX9P55771 341 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 FAM3BP58499 235 aaPredicted RBP13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SRPXP78539 464 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PSG4Q00888 419 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ID3Q02535 119 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM267Q0VDI3 215 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms