RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZNF808Q8N4W9 903 aaPredicted RBP15.68■□□□□ 0.1
PDLIM4-201ENST00000253754 KCNIP1Q9NZI2 227 aa15.68■□□□□ 0.1
PDLIM4-201ENST00000253754 DUSP13Q9UII6 198 aa15.68■□□□□ 0.1
PDLIM4-201ENST00000253754 NBASA2RRP1 2371 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 GPR37O15354 613 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 HBZP02008 142 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 SSTR5P35346 364 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 GLIPR1P48060 266 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 AKIRIN2Q53H80 203 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 MBNL2Q5VZF2 373 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 OR2Z1Q8NG97 314 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 GALMQ96C23 342 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 EIF5A2Q9GZV4 153 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 OR2D2Q9H210 308 aa15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 LIN7CQ9NUP9 197 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 STRAPQ9Y3F4 350 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-201ENST00000253754 RAMP3O60896 148 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 IL2RGP31785 369 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 GFRALQ6UXV0 394 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 S100PBPQ96BU1 408 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 DCTN5Q9BTE1 182 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 PRRG2O14669 202 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 WNT2P09544 360 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 MMP9P14780 707 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 EGR1P18146 543 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 TIMP3P35625 211 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 RAB5CP51148 216 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 BAXQ07812 192 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 SPRNQ5BIV9 151 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 DHRS7BQ6IAN0 325 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 LRRC29Q8WV35 223 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 FBXO7Q9Y3I1 522 aa15.66■□□□□ 0.1
PDLIM4-201ENST00000253754 IGHV3-43A0A0B4J1X8 118 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 M0R1B8 84 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 IGHV3-43DP0DP04 118 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 CCL20P78556 96 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 SLC35E4Q6ICL7 350 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 BEND4Q6ZU67 534 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 DOLPP1Q86YN1 238 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 LINC00518Q8N0U6 118 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 CD177Q8N6Q3 437 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 OR13A1Q8NGR1 328 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 RFESDQ8TAC1 157 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 TXNL1O43396 289 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 SLC25A6P12236 298 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 AKR1C3P42330 323 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 RPL30P62888 115 aaKnown RBP15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 KRBOX4Q5JUW0 171 aa15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 LSM10Q969L4 123 aaKnown RBP15.65■□□□□ 0.1
PDLIM4-201ENST00000253754 OOEPA6NGQ2 149 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 LINC00205P59089 165 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 SMIM21Q3B7S5 101 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 BTNL3Q6UXE8 466 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 ZNF645Q8N7E2 425 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 ATP5SQ99766 215 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 SH3BGRL2Q9UJC5 107 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 EDDM3AQ14507 147 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 HFEQ30201 348 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 VHLLQ6RSH7 139 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 STX12Q86Y82 276 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 RARRES2Q99969 163 aa15.64■□□□□ 0.09
PDLIM4-201ENST00000253754 DEFB108AA8MXU0 73 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 SYNGR2O43760 224 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 RPL23AP62750 156 aaKnown RBP15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 ARL16Q0P5N6 197 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 ZNF816Q0VGE8 651 aaPredicted RBP15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 LTC4SQ16873 150 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 EIF2S3LQ2VIR3 472 aaKnown RBP15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 FGFRL1Q8N441 504 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 PRR7Q8TB68 274 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 HEATR1Q9H583 2144 aaKnown RBP15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 CACNA1BQ00975 2339 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 IGSF10Q6WRI0 2623 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 METTL15P1P0C7V9 234 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 CEACAM8P31997 349 aaPredicted RBP15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 SULT1A1P50225 295 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 PEA15Q15121 130 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 COMMD1Q8N668 190 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 PLPPR2Q96GM1 343 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 RAB40CQ96S21 281 aa15.63■□□□□ 0.09
PDLIM4-201ENST00000253754 IGHV3OR15-7A0A075B7D8 119 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 TUBG1P23258 451 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 KCNJ16Q9NPI9 418 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 TUBG2Q9NRH3 451 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 PSENENQ9NZ42 101 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 CADP27708 2225 aa15.62■□□□□ 0.09
PDLIM4-201ENST00000253754 KRASP01116 189 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 G6PCP35575 357 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 BRWD1-AS2P59051 145 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 SPSB3Q6PJ21 355 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 HAPLN4Q86UW8 402 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 LINC00469Q8N7U9 141 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 NINJ1Q92982 152 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 WSB1Q9Y6I7 421 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 BMP5P22003 454 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 PRDX2P32119 198 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 EIF4EBP1Q13541 118 aaPredicted RBP15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 C22orf34Q6ZV56 151 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 C20orf24Q9BUV8 137 aa15.61■□□□□ 0.09
PDLIM4-201ENST00000253754 SFXN3Q9BWM7 321 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms