RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 AGMATQ9BSE5 352 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 MFFQ9GZY8 342 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 PLEKHF2Q9H8W4 249 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 TAS2R3Q9NYW6 316 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 MBD2Q9UBB5 411 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 LPAR3Q9UBY5 353 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 RNF150Q9ULK6 438 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 TNFSF18Q9UNG2 199 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 LINC00862A6NCI5 91 aa15□□□□□ -0.01
VIM-201ENST00000224237 A6NNC1 897 aa15□□□□□ -0.01
VIM-201ENST00000224237 LYNX1G3V0Z9 82 aa15□□□□□ -0.01
VIM-201ENST00000224237 RP2O75695 350 aa15□□□□□ -0.01
VIM-201ENST00000224237 SERPINE2P07093 398 aa15□□□□□ -0.01
VIM-201ENST00000224237 LYNX1P0DP58 116 aa15□□□□□ -0.01
VIM-201ENST00000224237 RPL31P62899 125 aaKnown RBP15□□□□□ -0.01
VIM-201ENST00000224237 RAB32Q13637 225 aa15□□□□□ -0.01
VIM-201ENST00000224237 GFOD1Q9NXC2 390 aa15□□□□□ -0.01
VIM-201ENST00000224237 CTSZQ9UBR2 303 aa15□□□□□ -0.01
VIM-201ENST00000224237 PSG11Q9UQ72 335 aa15□□□□□ -0.01
VIM-201ENST00000224237 LAMP3Q9UQV4 416 aa15□□□□□ -0.01
VIM-201ENST00000224237 CHD6Q8TD26 2715 aa15□□□□□ -0.01
VIM-201ENST00000224237 KMT2BQ9UMN6 2715 aaPredicted RBP15□□□□□ -0.01
VIM-201ENST00000224237 UBR5O95071 2799 aaPredicted RBP15□□□□□ -0.01
VIM-201ENST00000224237 ITGB1BP1O14713 200 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 ST8SIA5O15466 376 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 GOSR1O95249 250 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 VDAC1P21796 283 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 ZNF345Q14585 488 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 ESCO2Q56NI9 601 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 GAL3ST2Q9H3Q3 398 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 IDI2-AS1Q9NZ38 188 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 DVL1O14640 695 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 FCN3O75636 299 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 IGHV2-70P01814 119 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 LYL1P12980 280 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 CATR1Q13166 79 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 CLLU1Q5K131 121 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 PRSS54Q6PEW0 395 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 TMUB2Q71RG4 321 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 SPIN2AQ99865 258 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 SPIN2BQ9BPZ2 258 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 UBTD1Q9HAC8 227 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 C19orf12Q9NSK7 152 aa14.99□□□□□ -0.01
VIM-201ENST00000224237 LY6HO94772 140 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 OR2F2O95006 317 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 S100A10P60903 97 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 EIF4EBP1Q13541 118 aaPredicted RBP14.98□□□□□ -0.01
VIM-201ENST00000224237 OR2F1Q13607 317 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 INO80EQ8NBZ0 244 aaPredicted RBP14.98□□□□□ -0.01
VIM-201ENST00000224237 OR52M1Q8NGK5 317 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 DCUN1D4Q92564 292 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 C5orf30Q96GV9 206 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 ABHD14BQ96IU4 210 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 RNF126Q9BV68 326 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 GSX2Q9BZM3 304 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 ARL6Q9H0F7 186 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 ZFP57Q9NU63 452 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 SDHAF2Q9NX18 166 aa14.98□□□□□ -0.01
VIM-201ENST00000224237 UTP20O75691 2785 aaKnown RBP14.98□□□□□ -0.01
VIM-201ENST00000224237 A0A0D9SG52 128 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 H0YIZ8 118 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 CFDP00746 253 aaPredicted RBP14.97□□□□□ -0.01
VIM-201ENST00000224237 ZNF16P17020 682 aaPredicted RBP14.97□□□□□ -0.01
VIM-201ENST00000224237 GPR12P47775 334 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 RAB7AP51149 207 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 RAB14P61106 215 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 ZNF273Q14593 569 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 ZNF66Q6ZN08 573 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 ACOT7LQ6ZUV0 252 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 OR10A7Q8NGE5 316 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 H1FXQ92522 213 aaKnown RBP14.97□□□□□ -0.01
VIM-201ENST00000224237 ZNF714Q96N38 554 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 DAOP14920 347 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 SMCO1Q147U7 214 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 NMSQ5H8A3 153 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 HSD17B10Q99714 261 aaKnown RBP14.97□□□□□ -0.01
VIM-201ENST00000224237 ABHD14AQ9BUJ0 271 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 AUP1Q9Y679 476 aa14.97□□□□□ -0.01
VIM-201ENST00000224237 AKAP6Q13023 2319 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 CLEC18AA5D8T8 446 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 RNF222A6NCQ9 220 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 AP2S1P53680 142 aaPredicted RBP14.96□□□□□ -0.01
VIM-201ENST00000224237 SRSF1Q07955 248 aaKnown RBP eCLIP14.96□□□□□ -0.01
VIM-201ENST00000224237 Q3ZCU0 254 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 CLEC18CQ8NCF0 446 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 TIMD4Q96H15 378 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 FAM212BQ9NTI7 297 aaPredicted RBP14.96□□□□□ -0.01
VIM-201ENST00000224237 OR5AC2Q9NZP5 309 aa14.96□□□□□ -0.01
VIM-201ENST00000224237 KLF2Q9Y5W3 355 aaPredicted RBP14.96□□□□□ -0.01
VIM-201ENST00000224237 DEDDO75618 318 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 SCGB1D2O95969 90 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 RLN2P04090 185 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 ZNF134P52741 427 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 TMEM200BQ69YZ2 307 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 THOC7Q6I9Y2 204 aaKnown RBP14.95□□□□□ -0.02
VIM-201ENST00000224237 BTNL3Q6UXE8 466 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 KCNRGQ8N5I3 272 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 OR4D5Q8NGN0 318 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 RAB1CQ92928 201 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms