RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TIMM8AO60220 97 aaPredicted RBP8.44□□□□□ -1.06
USP11-201ENST00000218348 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
USP11-201ENST00000218348 RAB5AP20339 215 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 DTYMKP23919 212 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 CYCSP99999 105 aaKnown RBP8.44□□□□□ -1.06
USP11-201ENST00000218348 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 ZNF573Q86YE8 665 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 ZADH2Q8N4Q0 377 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 Q8NA96 180 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 RFESDQ8TAC1 157 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 KLF14Q8TD94 323 aaPredicted RBP8.44□□□□□ -1.06
USP11-201ENST00000218348 NMES1Q9C002 83 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 CLCF1Q9UBD9 225 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 TRAPPC2LQ9UL33 140 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 MED13LQ71F56 2210 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 H3BP45 60 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 K7EPK0 472 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 UCNP55089 124 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 FAM71E2Q8N5Q1 922 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 ERGIC1Q969X5 290 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 SARAFQ96BY9 339 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 PIK3IP1Q96FE7 263 aa8.44□□□□□ -1.06
USP11-201ENST00000218348 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
USP11-201ENST00000218348 NKX2-6A6NCS4 301 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 CST4P01036 141 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 CRYABP02511 175 aaKnown RBP8.43□□□□□ -1.06
USP11-201ENST00000218348 HLA-GP17693 338 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
USP11-201ENST00000218348 CAV2P51636 162 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 GAGE1Q13065 139 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 NRN1LQ496H8 165 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 PRSS54Q6PEW0 395 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 SSX7Q7RTT5 188 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 ZNF596Q8TC21 504 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 Q9N2K0 584 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 RASL12Q9NYN1 266 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 DOK5Q9P104 306 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 CHD3Q12873 2000 aaKnown RBP8.43□□□□□ -1.06
USP11-201ENST00000218348 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 CECR9P0C854 216 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 BMP5P22003 454 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
USP11-201ENST00000218348 TMEM187Q14656 261 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 Q6ZT83 130 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 BAP18Q8IXM2 172 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 TMEM217Q8N7C4 229 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 OR8U1Q8NH10 309 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 PIGMQ9H3S5 423 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 TUBD1Q9UJT1 453 aa8.43□□□□□ -1.06
USP11-201ENST00000218348 IGHV3-43A0A0B4J1X8 118 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 M0R1B8 84 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 C1QL1O75973 258 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 OR2H2O95918 312 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 IGHV3-43DP0DP04 118 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 IL2RGP31785 369 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 OR3A1P47881 315 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 EDDM3AQ14507 147 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 ZNF324BQ6AW86 544 aaPredicted RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 TMEM211Q6ICI0 200 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 BTNL3Q6UXE8 466 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 Q6ZS92 163 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 C15orf54Q8N8G6 183 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 HSD17B11Q8NBQ5 300 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 RTL8AQ9BWD3 113 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 CNTNAP3Q9BZ76 1288 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 OR51I2Q9H344 312 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 FBXL17Q9UF56 701 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 C3orf85A0A1B0GTC6 90 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 DEFB108AA8MXU0 73 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 MPPED1O15442 326 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 SS18L1O75177 396 aaPredicted RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 SOD3P08294 240 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 TMEM33P57088 247 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 LINC00205P59089 165 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 AESQ08117 197 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 ACSF3Q4G176 576 aaPredicted RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 CXorf66Q5JRM2 361 aaPredicted RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 C11orf42Q8N5U0 333 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 MOB3AQ96BX8 217 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 DCTN5Q9BTE1 182 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 IL36GQ9NZH8 169 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 MKRN2OSH3BPM6 223 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 FHITP49789 147 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 FAM201AQ5SY85 155 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
USP11-201ENST00000218348 ZNF808Q8N4W9 903 aaPredicted RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 MRPL30Q8TCC3 161 aaKnown RBP8.42□□□□□ -1.06
USP11-201ENST00000218348 SYT3Q9BQG1 590 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms