RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 BVESQ8NE79 360 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 OR10A7Q8NGE5 316 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 OR10V1Q8NGI7 309 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 ANGPTL6Q8NI99 470 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 CASTOR1Q8WTX7 329 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 DYRK2Q92630 601 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 TOMM40LQ969M1 308 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 TMEM230Q96A57 120 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 RAB39BQ96DA2 213 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 SLC5A7Q9GZV3 580 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 METTL8Q9H825 291 aaKnown RBP14.32□□□□□ -0.12
PHGDH-234ENST00000642041 TAF9BQ9HBM6 251 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 A0A0D9SG52 128 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 C5orf51A6NDU8 294 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 HSPB6O14558 160 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 RGS13O14921 159 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 MPPED1O15442 326 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF737O75373 536 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 PLAUP00749 431 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 RLN2P04090 185 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 RPA2P15927 270 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 SRD5A1P18405 259 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 NUP62P37198 522 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-234ENST00000642041 OR3A1P47881 315 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 MEF2CQ06413 473 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF672Q499Z4 452 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-234ENST00000642041 MUC15Q8N387 334 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 C2orf50Q96LR7 162 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 RAB1BQ9H0U4 201 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 PIPOXQ9P0Z9 390 aa14.31□□□□□ -0.12
PHGDH-234ENST00000642041 RBM7Q9Y580 266 aaKnown RBP14.31□□□□□ -0.12
PHGDH-234ENST00000642041 PPIAL4EA0A075B759 164 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 E7EQL1 145 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 PPIAL4DF5H284 164 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 GPR37O15354 613 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 PSPNO60542 156 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 PPIAL4FP0DN26 164 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 RPS2P15880 293 aaKnown RBP14.3□□□□□ -0.12
PHGDH-234ENST00000642041 FXYD4P59646 89 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 TMEM249Q2WGJ8 235 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 IGSF11Q5DX21 431 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 C12orf54Q6X4T0 127 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 LIAT1Q6ZQX7 453 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 C17orf107Q6ZR85 190 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF767PQ75MW2 155 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 LDLRAD3Q86YD5 345 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 BATF2Q8N1L9 274 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 PLPPR1Q8TBJ4 325 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 NEU4Q8WWR8 484 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-234ENST00000642041 ABHD14BQ96IU4 210 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 FXYD6Q9H0Q3 95 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF581Q9P0T4 197 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 CACFD1Q9UGQ2 172 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 JPT1Q9UK76 154 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 PPIAL4AQ9Y536 164 aa14.3□□□□□ -0.12
PHGDH-234ENST00000642041 C3orf85A0A1B0GTC6 90 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 EGR1P18146 543 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 PSMB6P28072 239 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 P2RX3P56373 397 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 H2BFSP57053 126 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 SUPT4H1P63272 117 aaKnown RBP14.29□□□□□ -0.12
PHGDH-234ENST00000642041 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-234ENST00000642041 SWI5Q1ZZU3 235 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 HFEQ30201 348 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 Q3ZCU0 254 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 PDLIM3Q53GG5 364 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-234ENST00000642041 STUMQ69YW2 141 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF788Q6ZQV5 615 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 CD177Q8N6Q3 437 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 CHIAQ9BZP6 476 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 KAAG1Q9UBP8 84 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 GAB2Q9UQC2 676 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 HSPB11Q9Y547 144 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 CADP27708 2225 aa14.29□□□□□ -0.12
PHGDH-234ENST00000642041 IGKV1D-17A0A075B6S4 117 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 A0A096LNT2 108 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 TRGV10A0A0A0MS01 117 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 hADV38S2A0JD32 116 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 ODAMA1E959 279 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 WNT9BO14905 357 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 SIGLEC5O15389 551 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 OR2F2O95006 317 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 CDS2O95674 445 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 IGHV4-39P01824 125 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 RCC1P18754 421 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-234ENST00000642041 GNRHRP30968 328 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 CEACAM6P40199 344 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 RAB7AP51149 207 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 BAMBIQ13145 260 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 CATR1Q13166 79 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 OR2F1Q13607 317 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF345Q14585 488 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 SMCO1Q147U7 214 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 PRR14LQ5THK1 2151 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 MALRD1Q5VYJ5 2156 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 C11orf87Q6NUJ2 197 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 INO80EQ8NBZ0 244 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-234ENST00000642041 SGMS2Q8NHU3 365 aa14.28□□□□□ -0.12
PHGDH-234ENST00000642041 CORO2AQ92828 525 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms