RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SOX6P35712 828 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 BLCAPP62952 87 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 HLA-DRB3P79483 266 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 Q3ZCU0 254 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 CDNFQ49AH0 187 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 ZNF880Q6PDB4 577 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 SAMD12Q8N8I0 201 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 IL1F10Q8WWZ1 152 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 SLC25A38Q96DW6 304 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
COLCA2-206ENST00000638573 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
COLCA2-206ENST00000638573 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
COLCA2-206ENST00000638573 BUB1B-PAK6H3BSN5 160 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 CD28P10747 220 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 LOXL3P58215 753 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 GNG2P59768 71 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 HTD2P86397 168 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 PITPNAQ00169 270 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 AANATQ16613 207 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 STEAP3Q658P3 488 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 CCDC144NLQ6NUI1 221 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 MZT2AQ6P582 158 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 OR2T6Q8NHC8 308 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 Q9N2K0 584 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.3
COLCA2-206ENST00000638573 COMMD3Q9UBI1 195 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
COLCA2-206ENST00000638573 FCGR3AP08637 254 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 CSF1P09603 554 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 ZNF182P17025 639 aaPredicted RBP13.15□□□□□ -0.3
COLCA2-206ENST00000638573 MNDAP41218 407 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 MADCAM1Q13477 382 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 HACD4Q5VWC8 232 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 C8orf31Q8N9H6 132 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 CFHR4Q92496 578 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 TOMM40LQ969M1 308 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 RPEQ96AT9 228 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
COLCA2-206ENST00000638573 CMYA5Q8N3K9 4069 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 TRAV18A0A075B6X5 111 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 TMEM235A6NFC5 223 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 OOSP1A8MZH6 123 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 TRDCB7Z8K6 153 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 HSPA12AO43301 675 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
COLCA2-206ENST00000638573 LPLP06858 475 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 DTYMKP23919 212 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 BRS3P32247 399 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 ZNF260Q3ZCT1 412 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
COLCA2-206ENST00000638573 LINC00311Q8N616 119 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 OR52L2PQ8NGH6 319 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
COLCA2-206ENST00000638573 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 OCSTAMPQ9BR26 566 aa13.14□□□□□ -0.31
COLCA2-206ENST00000638573 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
COLCA2-206ENST00000638573 SMIM31A0A1B0GVY4 71 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 G3V4G9 280 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 YPEL1O60688 119 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 ZBTB25P24278 435 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 PPP1CCP36873 323 aaKnown RBP13.13□□□□□ -0.31
COLCA2-206ENST00000638573 GNMTQ14749 295 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 SPCS2Q15005 226 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 MORN2Q502X0 79 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 TMEM69Q5SWH9 247 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 Q6ZPA2 131 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 Q8N2B8 174 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 OR2AK2Q8NG84 335 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 OR4A4PQ8NGN8 299 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 ISOC1Q96CN7 298 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 ABHD14AQ9BUJ0 271 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
COLCA2-206ENST00000638573 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 FABP7O15540 132 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 XRCC3O43542 346 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 APOA1P02647 267 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 SCTP09683 121 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 RAB7AP51149 207 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 DYNLT3P51808 116 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
COLCA2-206ENST00000638573 LIAT1Q6ZQX7 453 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
COLCA2-206ENST00000638573 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 RAB18Q9NP72 206 aa13.12□□□□□ -0.31
COLCA2-206ENST00000638573 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
COLCA2-206ENST00000638573 PITPNC1Q9UKF7 332 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms