RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CCL4P13236 92 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 CTF1Q16619 201 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 AWAT1Q58HT5 328 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 TMEM255AQ5JRV8 349 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 TEX30Q5JUR7 227 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 NUBPLQ8TB37 319 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 NTMQ9P121 344 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 LPAR3Q9UBY5 353 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 RBFOX2O43251 390 aaKnown RBP eCLIP14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 SLC6A1P30531 599 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 RPL31P62899 125 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 TMEM196Q5HYL7 178 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 ABHD14BQ96IU4 210 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 LINC00470Q9BZP3 86 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 A0A0A6YYD5 115 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 LHFPL5Q8TAF8 219 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 LINC00615Q96LM1 132 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 SLC25A37Q9NYZ2 338 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 TMEM189A5PLL7 270 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 ZFP36L2P47974 494 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 ISL1P61371 349 aa14.34□□□□□ -0.11
CACNA1A-258ENST00000638029 ABCA3Q99758 1704 aa14.33□□□□□ -0.11
CACNA1A-258ENST00000638029 ZNF415Q09FC8 603 aa14.33□□□□□ -0.11
CACNA1A-258ENST00000638029 MDP1Q86V88 176 aa14.33□□□□□ -0.11
CACNA1A-258ENST00000638029 SYS1Q8N2H4 156 aa14.33□□□□□ -0.11
CACNA1A-258ENST00000638029 SPSB1Q96BD6 273 aa14.33□□□□□ -0.11
CACNA1A-258ENST00000638029 MDH2P40926 338 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 FRRS1LQ9P0K9 344 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 SSTR5P35346 364 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 TRA2AQ13595 282 aaKnown RBP eCLIP14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 TRAV1-2A0A0B4J238 106 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 ADTRPQ96IZ2 230 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 hCG_38984A0A1B0GV85 526 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 FAM169BQ8N8A8 192 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 SCN5AQ14524 2016 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 RPS4Y2Q8TD47 263 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 DNASE2BQ8WZ79 361 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 Q9N2K0 584 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 CISD1Q9NZ45 108 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 HIGD1AQ9Y241 93 aa14.33□□□□□ -0.12
CACNA1A-258ENST00000638029 CXorf65A6NEN9 183 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 LEUTXA8MZ59 168 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 COL10A1Q03692 680 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 STPG1Q5TH74 334 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 FGF11Q92914 225 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 OPN3Q9H1Y3 402 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 GPR27Q9NS67 375 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 RNF7Q9UBF6 113 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 METTL1Q9UBP6 276 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 OR51B2Q9Y5P1 312 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 NHSQ6T4R5 1651 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 ARRDC5A6NEK1 342 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 FTH1P19P0C7X4 201 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 UNQ5815/PRO19632Q6UWF5 114 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 OR4C45A6NMZ5 311 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 GPX1P07203 203 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 OTOSQ8NHW6 89 aa14.32□□□□□ -0.12
CACNA1A-258ENST00000638029 HMX2A2RU54 273 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 KBTBD11O94819 623 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 TMEM136Q6ZRR5 245 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 MS4A5Q9H3V2 200 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 ZFP64Q9NPA5 681 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 IGLV3-27P01718 113 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 IGHV3-48P01763 117 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 SPNS2Q8IVW8 549 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 PGFP49763 221 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 MRM1Q6IN84 353 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 C9orf170A2RU37 121 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 ZNF506Q5JVG8 444 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 CLEC18BQ6UXF7 455 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 TSPAN32Q96QS1 320 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 A0A1B0GV90 55 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 SMIM6P0DI80 62 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 PGA3P0DJD8 388 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 TMEM33P57088 247 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 DCAF12L2Q5VW00 463 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 PRSS41Q7RTY9 318 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 ATOH7Q8N100 152 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 SSC4DQ8WTU2 575 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 TMEM167BQ9NRX6 74 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 TMEM56-RWDD3S4R434 201 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 ZNF600Q6ZNG1 722 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 MRGPRFQ96AM1 343 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 MRGPRX3Q96LB0 322 aa14.31□□□□□ -0.12
CACNA1A-258ENST00000638029 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 SPTY2D1-AS1A0A0U1RR47 76 aa14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 MBD1Q9UIS9 605 aaPredicted RBP14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 SF3B6Q9Y3B4 125 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 H3BTX0 84 aa14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 LRRC75BQ2VPJ9 315 aa14.3□□□□□ -0.12
CACNA1A-258ENST00000638029 CCDC144NLQ6NUI1 221 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms