RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CCL20P78556 96 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 RUNX1Q01196 453 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
GPC3-204ENST00000631057 KRBOX4Q5JUW0 171 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 ATP1A1-AS1Q5TC04 95 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 SP5Q6BEB4 398 aaPredicted RBP6.82□□□□□ -1.32
GPC3-204ENST00000631057 MYPOPQ86VE0 399 aaPredicted RBP6.82□□□□□ -1.32
GPC3-204ENST00000631057 ZBTB34Q8NCN2 500 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 SLC25A40Q8TBP6 338 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 PSMG3Q9BT73 122 aaPredicted RBP6.82□□□□□ -1.32
GPC3-204ENST00000631057 C20orf24Q9BUV8 137 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 ESRP2Q9H6T0 727 aaKnown RBP6.82□□□□□ -1.32
GPC3-204ENST00000631057 COA4Q9NYJ1 87 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 PPP1R3CQ9UQK1 317 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 RFNGQ9Y644 331 aa6.82□□□□□ -1.32
GPC3-204ENST00000631057 PRR14LQ5THK1 2151 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 TTC28Q96AY4 2481 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 PTPRBP23467 1997 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 TRAV39A0A0B4J263 110 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 A6NLC8 198 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 CDIPTO14735 213 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 SCAF4O95104 1147 aaKnown RBP6.81□□□□□ -1.32
GPC3-204ENST00000631057 HAND1O96004 215 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 IGKV1-5P01602 117 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 IGLV2-14P01704 120 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 IGHG3P01860 377 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 S100A6P06703 90 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 SRP19P09132 144 aaKnown RBP6.81□□□□□ -1.32
GPC3-204ENST00000631057 AGAP20933 346 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 TUBG1P23258 451 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 HOXC12P31275 282 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 MAS1LP35410 378 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 ICAM4Q14773 271 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 HAGHQ16775 308 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 KHDC3LQ587J8 217 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 Q6ZT83 130 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 VASH2Q86V25 355 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 PRR18Q8N4B5 295 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 DRAM1Q8N682 238 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
GPC3-204ENST00000631057 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 MALSU1Q96EH3 234 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 C12orf57Q99622 126 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 PARD6GQ9BYG4 376 aaPredicted RBP6.81□□□□□ -1.32
GPC3-204ENST00000631057 BCL2L14Q9BZR8 327 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 HES4Q9HCC6 221 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 TUBG2Q9NRH3 451 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 PSENENQ9NZ42 101 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 OR14J1Q9UGF5 321 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 PUS1Q9Y606 427 aaKnown RBP eCLIP6.81□□□□□ -1.32
GPC3-204ENST00000631057 ZNF318Q5VUA4 2279 aa6.81□□□□□ -1.32
GPC3-204ENST00000631057 SVILO95425 2214 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 A0A087WWC5 75 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 H3BP45 60 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 H3BQ15 152 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 WDR1O75083 606 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 LYZL6O75951 148 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 OR2C1O95371 312 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 S100A8P05109 93 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 GRPP07492 148 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 IAPPP10997 89 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 DAOP14920 347 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 CBR1P16152 277 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 ERVS71-1P61550 626 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 PMP22Q01453 160 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 PSG7Q13046 419 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 GUSBP1Q15486 140 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 MSMO1Q15800 293 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 IGFBP7Q16270 282 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 EIF2S3LQ2VIR3 472 aaKnown RBP6.8□□□□□ -1.32
GPC3-204ENST00000631057 ACSF3Q4G176 576 aaPredicted RBP6.8□□□□□ -1.32
GPC3-204ENST00000631057 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 SLC35E4Q6ICL7 350 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 Q6ZRM9 215 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 TMPRSS7Q7RTY8 843 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 ZNF525Q8N782 197 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 ZNF645Q8N7E2 425 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 CLDND2Q8NHS1 167 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 ISOC2Q96AB3 205 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 COL25A1Q9BXS0 654 aaPredicted RBP6.8□□□□□ -1.32
GPC3-204ENST00000631057 CXXC4Q9H2H0 198 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 MMP24Q9Y5R2 645 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 FREM2Q5SZK8 3169 aa6.8□□□□□ -1.32
GPC3-204ENST00000631057 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 A0A1W2PPE2 198 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 OOEPA6NGQ2 149 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 UBE2CO00762 179 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 AQP7O14520 342 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 IFNA17P01571 189 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 METTL15P1P0C7V9 234 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 COX5AP20674 150 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 IL2RGP31785 369 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 MEOX2P50222 304 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 UBE2KP61086 200 aa6.79□□□□□ -1.32
GPC3-204ENST00000631057 RPS23P62266 143 aaKnown RBP6.79□□□□□ -1.32
GPC3-204ENST00000631057 SNRPEP62304 92 aaKnown RBP6.79□□□□□ -1.32
GPC3-204ENST00000631057 SERF2P84101 59 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms