RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CHST4Q8NCG5 386 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR5AP2Q8NGF4 316 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR8B3Q8NGG8 313 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR52N4Q8NGI2 321 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR13C8Q8NGS7 320 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR1S1Q8NH92 325 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 PPP1R1CQ8WVI7 109 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 ARL11Q969Q4 196 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 SPSB1Q96BD6 273 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 WDR89Q96FK6 387 aaPredicted RBP4.35□□□□□ -1.71
SHMT1-211ENST00000618902 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 AQP10Q96PS8 301 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 OR8B2Q96RD0 313 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 SLC6A7Q99884 636 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 NRIP2Q9BQI9 281 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 SSBP3Q9BWW4 388 aaPredicted RBP4.35□□□□□ -1.71
SHMT1-211ENST00000618902 TM2D1Q9BX74 207 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 SEC11CQ9BY50 192 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 PLEKHA2Q9HB19 425 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 CHMP1AQ9HD42 196 aaPredicted RBP4.35□□□□□ -1.71
SHMT1-211ENST00000618902 MTCH1Q9NZJ7 389 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 IL36RNQ9UBH0 155 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 CTSZQ9UBR2 303 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 CLN8Q9UBY8 286 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 HSF4Q9ULV5 492 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 PRELID1Q9Y255 219 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
SHMT1-211ENST00000618902 POLDIP2Q9Y2S7 368 aa4.35□□□□□ -1.71
SHMT1-211ENST00000618902 IGKV1D-17A0A075B6S4 117 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 hCG_1809904A0A1W2PP81 198 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 A0A1W2PPE2 198 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 A0A1W2PR64 198 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 A0A1W2PRV1 198 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM218A2RU14 115 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C5orf51A6NDU8 294 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OOEPA6NGQ2 149 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C22orf46C9J442 243 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TRAPPC2LH3BP13 241 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 H7C2Y5 167 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PHF1O43189 567 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ENSAO43768 121 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ANGPTL7O43827 346 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 KDM4BO94953 1096 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PLATP00750 562 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 AVPP01185 164 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GYPAP02724 150 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PSG2P11465 335 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 BCL3P20749 454 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 DTYMKP23919 212 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PAX6P26367 422 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PTGFRP43088 359 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 HAAOP46952 286 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 CEBPDP49716 269 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 COMPP49747 757 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 FUT6P51993 359 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GNB2P62879 340 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SRPXP78539 464 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PAX2Q02962 417 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PAX8Q06710 450 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PDZK1IP1Q13113 114 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF273Q14593 569 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SMCO1Q147U7 214 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PDCD1Q15116 288 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 RSU1Q15404 277 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GUCA2BQ16661 112 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GPR157Q5UAW9 335 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 STUMQ69YW2 141 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ELP2Q6IA86 826 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GLIPR1L1Q6UWM5 242 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 DHRS11Q6UWP2 260 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ALKAL2Q6UX46 152 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 RBMS3Q6XE24 437 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C1orf229Q6ZS94 237 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SLC25A26Q70HW3 274 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 LHFPL1Q86WI0 220 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF573Q86YE8 665 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SGPP2Q8IWX5 399 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 IQCF2Q8IXL9 164 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 Q8IYB0 196 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 FAM185AQ8N0U4 392 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM86BQ8N661 226 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 CD177Q8N6Q3 437 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 KIR3DL3Q8N743 410 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 FAM216BQ8N7L0 139 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 POC1AQ8NBT0 407 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 CLRN3Q8NCR9 226 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OR4D10Q8NGI6 311 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OR52B4Q8NGK2 314 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OR5D18Q8NGL1 313 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 OR5H2Q8NGV7 314 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 FAM216AQ8WUB2 273 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ST8SIA4Q92187 359 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SLAMF9Q96A28 289 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ABHD14BQ96IU4 210 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C1orf147Q96MC9 270 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 GAFA1Q96PS6 74 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 CCL13Q99616 98 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms