RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PRR18Q8N4B5 295 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 OR1P1Q8NH06 330 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 HIST1H2AAQ96QV6 131 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 TAAR6Q96RI8 345 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF2Q9BSG1 426 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 TMEM208Q9BTX3 173 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 VAX2Q9UIW0 290 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 WSB1Q9Y6I7 421 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 CUL9Q8IWT3 2517 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 AQP7O14520 342 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 EPHA1P21709 976 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 UBE2NP61088 152 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 CCL20P78556 96 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 ICAM4Q14773 271 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 C9orf106Q8NAJ2 232 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 HS3ST6Q96QI5 342 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 HIPK2Q9H2X6 1198 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF442Q9H7R0 627 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 ANKRD11Q6UB99 2663 aaPredicted RBP14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 SCGB1D2O95969 90 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 IDH3GP51553 393 aaPredicted RBP14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 TGFBR3Q03167 851 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 VWA1Q6PCB0 445 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 ZADH2Q8N4Q0 377 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 CYB561D1Q8N8Q1 229 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 MRPL24Q96A35 216 aaKnown RBP14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 GLRX2Q9NS18 164 aa14.52□□□□□ -0.08
SHKBP1-205ENST00000594973 A0A1B0GV50 99 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 ANKRD30BLA7E2S9 258 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 ZNF705GA8MUZ8 300 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 PDCD6O75340 191 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 OPN1MWP04001 364 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 CTSDP07339 412 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 OPN1MW2P0DN77 364 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 OPN1MW3P0DN78 364 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 IGFBP7Q16270 282 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 TBC1D28Q2M2D7 210 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 C4orf17Q53FE4 359 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 SARAFQ96BY9 339 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 OPN3Q9H1Y3 402 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 IL36RNQ9UBH0 155 aa14.52□□□□□ -0.09
SHKBP1-205ENST00000594973 CEP295Q9C0D2 2601 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 CRYM-AS1A6NIL9 109 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 CEACAM4O75871 244 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 CYB5R3P00387 301 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 CA6P23280 308 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 RTP5Q14D33 572 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 DAZAP2Q15038 168 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 RBMXL1Q96E39 390 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 MTCH1Q9NZJ7 389 aa14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 RP1L1Q8IWN7 2480 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-205ENST00000594973 C3orf80F5H4A9 247 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 KLK10O43240 276 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 SYNGR1O43759 233 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 FOXF2Q12947 444 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 IQCJQ1A5X6 159 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 SLC35G3Q8N808 338 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 LRFN3Q9BTN0 628 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 TMEM210A6NLX4 147 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 HSPB6O14558 160 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 FUT3P21217 361 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 DTYMKP23919 212 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 DUSP1P28562 367 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 KIR2DL2P43627 348 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 ZNF266Q14584 549 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 Q6ZT83 130 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 OR10A7Q8NGE5 316 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 OR4X1Q8NH49 305 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 ZNF488Q96MN9 340 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 SYT3Q9BQG1 590 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 LIME1Q9H400 295 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 SRD5A3Q9H8P0 318 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 CACNA1GO43497 2377 aa14.5□□□□□ -0.09
SHKBP1-205ENST00000594973 PDLIM4P50479 330 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 CEBPGP53567 150 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 ERVS71-1P61550 626 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 OR5A2Q8NGI9 324 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 OR2G3Q8NGZ4 309 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 OR5P3Q8WZ94 311 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 CTDSP1Q9GZU7 261 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 NECAP2Q9NVZ3 263 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 A0A1B0GU03 582 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 TRAPPC2LH3BP13 241 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 RPLP1P05386 114 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 CCKARP32238 428 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 GABRA6Q16445 453 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 TOMM40LQ969M1 308 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 ACY3Q96HD9 319 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 OR2J1Q9GZK6 312 aa14.49□□□□□ -0.09
SHKBP1-205ENST00000594973 MED19A0JLT2 244 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 RRP8O43159 456 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 HBE1P02100 147 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 PAX5Q02548 391 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 GUSBP1Q15486 140 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 C1orf194Q5T5A4 169 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 Q6ZPA2 131 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 DECR2Q9NUI1 292 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 AGFG2O95081 481 aa14.48□□□□□ -0.09
SHKBP1-205ENST00000594973 FXYD4P59646 89 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms