RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 KIR2DS2P43631 304 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 AKR1C2P52895 323 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 C11orf91Q3C1V1 193 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 Q3ZCU0 254 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 ZNF660Q6AZW8 331 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 CLEC18BQ6UXF7 455 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 ZNF818PQ6ZRF7 136 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TBC1D26Q86UD7 250 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 ADAD2Q8NCV1 583 aaKnown RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 OR52M1Q8NGK5 317 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 OR5M8Q8NGP6 311 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 OR8U1Q8NH10 309 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 OR51H1Q8NH63 302 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 UBALD1Q8TB05 177 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 THAP6Q8TBB0 222 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TCTEX1D2Q8WW35 142 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 GALNT14Q96FL9 552 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 YPEL2Q96QA6 119 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 S1PR3Q99500 378 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 HSD17B10Q99714 261 aaKnown RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 NEURL2Q9BR09 285 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 ABHD14AQ9BUJ0 271 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 SSBP3Q9BWW4 388 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 CHIAQ9BZP6 476 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 RANGRFQ9HD47 186 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 RAB18Q9NP72 206 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 CCL28Q9NRJ3 127 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 DCAF16Q9NXF7 216 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 PIPOXQ9P0Z9 390 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 RALYQ9UKM9 306 aaKnown RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 PRELID3BQ9Y3B1 194 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 AMMECR1Q9Y4X0 333 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 LAMA5O15230 3695 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 USP24Q9UPU5 2620 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 LYNX1G3V0Z9 82 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 BOLA2-SMG1P6H3BVE0 249 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 F2RL2O00254 374 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 WRBO00258 174 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ITGB1BP1O14713 200 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RAB29O14966 203 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TNFSF12O43508 249 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RP2O75695 350 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 CD8AP01732 235 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RBP4P02753 201 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RLN2P04090 185 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 OR5AC1P0C628 307 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 LYNX1P0DP58 116 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 SELLP14151 372 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 PLA2G2AP14555 144 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 PVALBP20472 110 aaPredicted RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 COL8A2P25067 703 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 GNG10P50151 68 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ATP5J2P56134 94 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 DSCR9P59020 149 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ERVFRD-1P60508 538 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ERVK-16P61578 105 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 HOXA4Q00056 320 aaPredicted RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 CR1LQ2VPA4 569 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TMEM268Q5VZI3 342 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 SP5Q6BEB4 398 aaPredicted RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 HEPN1Q6WQI6 88 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ZNF66Q6ZN08 573 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 NOXA1Q86UR1 476 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TGIF2LYQ8IUE0 185 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 BVESQ8NE79 360 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 OR11H7Q8NGC8 314 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 OR52L2PQ8NGH6 319 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 OR2T35Q8NGX2 323 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 OR10X1Q8NGY0 326 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RFESDQ8TAC1 157 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 CD300LFQ8TDQ1 290 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 FAM168AQ92567 244 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 CORO2AQ92828 525 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TNFRSF14Q92956 283 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 IL22RA2Q969J5 263 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TMEM230Q96A57 120 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RRNAD1Q96FB5 475 aaKnown RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 ADTRPQ96IZ2 230 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 DMRTB1Q96MA1 342 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 FAM210AQ96ND0 272 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 RTBDNQ9BSG5 229 aaPredicted RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 DCTN5Q9BTE1 182 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 NARFLQ9H6Q4 476 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 PATZ1Q9HBE1 687 aaKnown RBP5.13□□□□□ -1.59
LIG3-206ENST00000586058 GFOD1Q9NXC2 390 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ONECUT1Q9UBC0 465 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 PSG11Q9UQ72 335 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 TMED3Q9Y3Q3 217 aa5.13□□□□□ -1.59
LIG3-206ENST00000586058 ITPR1Q14643 2758 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 FXYD6-FXYD2A0A087WZ82 144 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 PPIAL4CA0A0B4J2A2 164 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 IGKV1D-13A0A0B4J2D9 117 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 IGKV1-6A0A0C4DH72 117 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 A0A1B0GW55 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 C15orf65H3BRN8 121 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 CCSO14618 274 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 TXNL1O43396 289 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 ENSAO43768 121 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms