RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 C15orf65H3BRN8 121 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 JTBO76095 146 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 IGKV1-5P01602 117 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 SELLP14151 372 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 EWSR1Q01844 656 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMPD3-203ENST00000563226 ID3Q02535 119 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 BSPH1Q075Z2 132 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 TUSC1Q2TAM9 212 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 MST1LQ2TV78 715 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 FAM90A1Q86YD7 464 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 TGIF2LYQ8IUE0 185 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 STPG2Q8N412 459 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 ZNF808Q8N4W9 903 aaPredicted RBP15.95■□□□□ 0.14
SMPD3-203ENST00000563226 ZNF645Q8N7E2 425 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 LURAP1Q96LR2 239 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 GCM1Q9NP62 436 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 GATA4P43694 442 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 SELENOVP59797 346 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 EIF5AP63241 154 aaKnown RBP15.95■□□□□ 0.14
SMPD3-203ENST00000563226 TNFAIP6P98066 277 aaPredicted RBP15.95■□□□□ 0.14
SMPD3-203ENST00000563226 PAX5Q02548 391 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 OR2C3Q8N628 320 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 TOLLIPQ9H0E2 274 aa15.95■□□□□ 0.14
SMPD3-203ENST00000563226 LIN7CQ9NUP9 197 aaKnown RBP15.95■□□□□ 0.14
SMPD3-203ENST00000563226 ZNF705EA8MWA4 302 aaPredicted RBP15.94■□□□□ 0.14
SMPD3-203ENST00000563226 DEFB108AA8MXU0 73 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 SIGLEC5O15389 551 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 PITX3O75364 302 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 PTAFRP25105 342 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 RPL30P62888 115 aaKnown RBP15.94■□□□□ 0.14
SMPD3-203ENST00000563226 LTC4SQ16873 150 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 C1QTNF12Q5T7M4 302 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 DUX4L9Q6RFH8 374 aaPredicted RBP15.94■□□□□ 0.14
SMPD3-203ENST00000563226 ODF3L1Q8IXM7 274 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 UBAC2Q8NBM4 344 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 SNX22Q96L94 193 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 LPAR3Q9UBY5 353 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 ZZEF1O43149 2961 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 USF3Q68DE3 2245 aa15.94■□□□□ 0.14
SMPD3-203ENST00000563226 DYSFO75923 2080 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 ODAMA1E959 279 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 CYB5R3P00387 301 aaPredicted RBP15.93■□□□□ 0.14
SMPD3-203ENST00000563226 CAV2P51636 162 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 EIF4EBP1Q13541 118 aaPredicted RBP15.93■□□□□ 0.14
SMPD3-203ENST00000563226 NINJ1Q92982 152 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 ABHD14BQ96IU4 210 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 PLEKHF2Q9H8W4 249 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 KIAA1324LA8MWY0 1029 aaPredicted RBP15.93■□□□□ 0.14
SMPD3-203ENST00000563226 KALRNO60229 2985 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 RBPJQ06330 500 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 OR2B11Q5JQS5 317 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 RNASE11Q8TAA1 199 aaKnown RBP15.93■□□□□ 0.14
SMPD3-203ENST00000563226 ARV1Q9H2C2 271 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 DCAF16Q9NXF7 216 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 IL19Q9UHD0 177 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 RNF115Q9Y4L5 304 aa15.93■□□□□ 0.14
SMPD3-203ENST00000563226 KRBOX1C9JBD0 128 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 MGST3O14880 152 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 CHST1O43916 411 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 OMGP23515 440 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 LPAR6P43657 344 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 ADIPOQQ15848 244 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 ADAM5Q6NVV9 412 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 BTNL3Q6UXE8 466 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 RND1Q92730 232 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 MARC2Q969Z3 335 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 LYRM2Q9NU23 88 aaPredicted RBP15.92■□□□□ 0.14
SMPD3-203ENST00000563226 RNF7Q9UBF6 113 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 CACNG5Q9UF02 275 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 DSCAML1Q8TD84 2053 aa15.92■□□□□ 0.14
SMPD3-203ENST00000563226 ROS1P08922 2347 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 A0A1B0GU03 582 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 K7N7A8 449 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 ST8SIA5O15466 376 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 RAMP3O60896 148 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 CRYZL1O95825 349 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 PVALBP20472 110 aaPredicted RBP15.91■□□□□ 0.14
SMPD3-203ENST00000563226 AKR1C2P52895 323 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 PAX9P55771 341 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 ZNF295-AS1Q8N0V1 137 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 ZCCHC24Q8N2G6 241 aaKnown RBP15.91■□□□□ 0.14
SMPD3-203ENST00000563226 TMEM252Q8N6L7 170 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 LSM10Q969L4 123 aaKnown RBP15.91■□□□□ 0.14
SMPD3-203ENST00000563226 PLPPR2Q96GM1 343 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 WFIKKN1Q96NZ8 548 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 SEBOXQ9HB31 216 aaPredicted RBP15.91■□□□□ 0.14
SMPD3-203ENST00000563226 TRGV8A0A0C4DH27 118 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 B8ZZF3 427 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 MED6O75586 246 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 OR4A8P0C604 315 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 SULT1A2P50226 295 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 LINC00205P59089 165 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 VAMP2P63027 116 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 PXDC1Q5TGL8 231 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 BPIFCQ8NFQ6 507 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 FAM222BQ8WU58 562 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 SMIM8Q96KF7 97 aa15.91■□□□□ 0.14
SMPD3-203ENST00000563226 SPINT2O43291 252 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 SLC25A6P12236 298 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 UCNP55089 124 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms