RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 HEXAP06865 529 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 CEACAM6P40199 344 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 S100A10P60903 97 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ETV3LQ6ZN32 361 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 TGIF2LYQ8IUE0 185 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 LGI3Q8N145 548 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 SVBPQ8N300 66 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 SLC35G3Q8N808 338 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 MRGPRDQ8TDS7 321 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ZDHHC8Q9ULC8 765 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 FAM96BQ9Y3D0 163 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ITPR1Q14643 2758 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 PIEZO1Q92508 2521 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM218A2RU14 115 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 NKX2-6A6NCS4 301 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 FAM90A27PA6NNH2 459 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 PGLYRP1O75594 196 aaPredicted RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ASCL1P50553 236 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM268Q5VZI3 342 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 SSX8Q7RTT4 187 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 FAM90A1Q86YD7 464 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 FOXRED2Q8IWF2 684 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 CMTM1Q8IZ96 169 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ZCCHC24Q8N2G6 241 aaKnown RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 EIF4E3Q8N5X7 224 aaKnown RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 BARX1Q9HBU1 254 aaPredicted RBP7.87□□□□□ -1.15
LINC00838-201ENST00000562956 KCNIP1Q9NZI2 227 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 A0A1B0GW55 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 KANTRA0A1W2PQU2 76 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 OOEPA6NGQ2 149 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 S100A6P06703 90 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L2P0CJ85 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L3P0CJ86 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L4P0CJ87 422 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L5P0CJ88 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L6P0CJ89 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4L7P0CJ90 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 LYL1P12980 280 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 CD80P33681 288 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 PPT1P50897 306 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 CCL8P80075 99 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 EDDM3AQ14507 147 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 SMCO1Q147U7 214 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 CDSNQ15517 529 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 PRSS54Q6PEW0 395 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DMRTC2Q8IXT2 367 aaPredicted RBP7.86□□□□□ -1.15
LINC00838-201ENST00000562956 ZNRF1Q8ND25 227 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 OR13A1Q8NGR1 328 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 GALMQ96C23 342 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DCTN5Q9BTE1 182 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 SLC25A32Q9H2D1 315 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DUX4Q9UBX2 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 UBE2J1Q9Y385 318 aaPredicted RBP7.86□□□□□ -1.15
LINC00838-201ENST00000562956 MSGN1A6NI15 193 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 SHISA9B4DS77 424 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 F5H0A9 414 aaPredicted RBP7.86□□□□□ -1.15
LINC00838-201ENST00000562956 CYB5R3P00387 301 aaPredicted RBP7.86□□□□□ -1.15
LINC00838-201ENST00000562956 HBZP02008 142 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 RNF224P0DH78 156 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 CHRNB4P30926 498 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 SSTR5P35346 364 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 OR52L2PQ8NGH6 319 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 NEUROG1Q92886 237 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 DCAF16Q9NXF7 216 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 PCNX1Q96RV3 2341 aa7.86□□□□□ -1.15
LINC00838-201ENST00000562956 AGPAT2O15120 278 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 BCL2L11O43521 198 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 OR8U9P0C7N5 309 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 TNFSF4P23510 183 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 ADORA2A-AS1P86434 159 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 CLINT1Q14677 625 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 GNMTQ14749 295 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 OR52M1Q8NGK5 317 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 OR8U1Q8NH10 309 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 LINC01560Q8TB33 94 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 PLPPR2Q96GM1 343 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM56Q96MV1 263 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 RNF7Q9UBF6 113 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM56-RWDD3S4R434 201 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 A0A1W2PPE3 182 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 CDS2O95674 445 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 SCGB1D2O95969 90 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 MBPP02686 304 aaPredicted RBP7.85□□□□□ -1.15
LINC00838-201ENST00000562956 SELLP14151 372 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 IL2RGP31785 369 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 PAX5Q02548 391 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 NCMAPQ5T1S8 102 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 SELENOHQ8IZQ5 122 aaKnown RBP7.85□□□□□ -1.15
LINC00838-201ENST00000562956 OR51H1Q8NH63 302 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 NGBQ9NPG2 151 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 CHD3Q12873 2000 aaKnown RBP7.85□□□□□ -1.15
LINC00838-201ENST00000562956 POLEQ07864 2286 aa7.85□□□□□ -1.15
LINC00838-201ENST00000562956 C17orf100A8MU93 164 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms