RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RDH8Q9NYR8 311 aa10.17□□□□□ -0.78
SHMT2-221ENST00000555773 EHFQ9NZC4 300 aa10.17□□□□□ -0.78
SHMT2-221ENST00000555773 OR1A1Q9P1Q5 309 aa10.17□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF69Q9UC07 566 aa10.17□□□□□ -0.78
SHMT2-221ENST00000555773 YLPM1P49750 1951 aaKnown RBP10.17□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF469Q96JG9 3925 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-221ENST00000555773 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 DISC1C4P0D8 188 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 TUSC2O75896 110 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 IGLV1-47P01700 117 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 COX7A1P24310 79 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 FCGR2CP31995 323 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 TSPAN5P62079 268 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 KLF9Q13886 244 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-221ENST00000555773 GNMTQ14749 295 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 MIDNQ504T8 468 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 CT45A1Q5HYN5 189 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF626Q68DY1 528 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF57Q68EA5 555 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-221ENST00000555773 SLC25A48Q6ZT89 311 aaKnown RBP10.16□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF439Q8NDP4 499 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 OR2AK2Q8NG84 335 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 CT45A3Q8NHU0 189 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 SMR3AQ99954 134 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 C11orf54Q9H0W9 315 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-221ENST00000555773 OR2W1Q9Y3N9 320 aa10.16□□□□□ -0.78
SHMT2-221ENST00000555773 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 CENPXA8MT69 81 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 J3QRK9 145 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 M0QYG6 137 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 UPK1BO75841 260 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 SLC22A5O76082 557 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 FSHBP01225 129 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 HNF1AP20823 631 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 NFYAP23511 347 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF134P52741 427 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 LGALS4P56470 323 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 HLA-DRB5Q30154 266 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 KLF17Q5JT82 389 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 FAM120AOSQ5T036 256 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF660Q6AZW8 331 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 LEAP2Q969E1 77 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 C7orf50Q9BRJ6 194 aaKnown RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 AGMATQ9BSE5 352 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 ABHD14AQ9BUJ0 271 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 TINAGL1Q9GZM7 467 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 MMP28Q9H239 520 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 NUP50Q9UKX7 468 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 GAB2Q9UQC2 676 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 AMMECR1Q9Y4X0 333 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-221ENST00000555773 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
SHMT2-221ENST00000555773 DSCAML1Q8TD84 2053 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 F8P00451 2351 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 FAM172BPA6NC97 362 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 NAP1L6A6NFF2 107 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 BUB1B-PAK6H3BSN5 160 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 NPFFO15130 113 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 PPYP01298 95 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 IGHV3-7P01780 117 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 ARG1P05089 322 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 IL3RAP26951 378 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 HTR1DP28221 377 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 CEACAM3P40198 252 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 GNG10P50151 68 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 LUMP51884 338 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-221ENST00000555773 DLX1P56177 255 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 KLRD1Q13241 179 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 UTF1Q5T230 341 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 FAM53AQ6NSI3 398 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-221ENST00000555773 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 OR4C16Q8NGL9 310 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 OR10X1Q8NGY0 326 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 TERB2Q8NHR7 220 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 BORCS5Q969J3 196 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 SLC6A7Q99884 636 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 PRRT1Q99946 306 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF2Q9BSG1 426 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-221ENST00000555773 HRASLSQ9HDD0 168 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 ABCB10Q9NRK6 738 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 PIPOXQ9P0Z9 390 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 DPM3Q9P2X0 92 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 SCP2D1Q9UJQ7 156 aa10.14□□□□□ -0.79
SHMT2-221ENST00000555773 RBM7Q9Y580 266 aaKnown RBP10.14□□□□□ -0.79
SHMT2-221ENST00000555773 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 LEUTXA8MZ59 168 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 RAB29O14966 203 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 AMY2AP04746 511 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 OR8U9P0C7N5 309 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF735P0CB33 412 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 IGHV4-38-2P0DP08 117 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 EPHA1P21709 976 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 AADACP22760 399 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF137PP52743 207 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 UCP3P55916 312 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 HERV-K104P61576 105 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 PRB3Q04118 309 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms