RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CD37P11049 281 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 SRMP19623 302 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 PPP1CCP36873 323 aaKnown RBP11.26□□□□□ -0.61
COL2A1-209ENST00000546974 SPHARQ15513 63 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 MMDQ15546 238 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 HMGN3Q15651 99 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 RBM48Q5RL73 367 aaKnown RBP11.26□□□□□ -0.61
COL2A1-209ENST00000546974 OR10K2Q6IF99 312 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 LCNL1Q6ZST4 164 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 KCTD7Q96MP8 289 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 TMED9Q9BVK6 235 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 TMEM59Q9BXS4 323 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
COL2A1-209ENST00000546974 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
COL2A1-209ENST00000546974 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 SLC22A1O15245 554 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 PSMB8P28062 276 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 HTR2CP28335 458 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 ACTBP60709 375 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 DCTN2Q13561 401 aaKnown RBP11.25□□□□□ -0.61
COL2A1-209ENST00000546974 VAX1Q5SQQ9 334 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 C6orf201Q7Z4U5 140 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 CEACAM19Q7Z692 300 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 OR2AK2Q8NG84 335 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 FAAP24Q9BTP7 215 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
COL2A1-209ENST00000546974 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
COL2A1-209ENST00000546974 RAMP3O60896 148 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 NAPSAO96009 420 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 UCHL1P09936 223 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 SLC2A2P11168 524 aaPredicted RBP11.24□□□□□ -0.61
COL2A1-209ENST00000546974 MYF6P23409 242 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 RAB25P57735 213 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 QRFPP83859 136 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 DGCR2P98153 550 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 UNC119Q13432 240 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 IRF3Q14653 427 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 MED22Q15528 200 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 DEFB136Q30KP8 78 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 NPBQ8NG41 125 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 OR6M1Q8NGM8 313 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 OR5M8Q8NGP6 311 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 RITA1Q96K30 269 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 NICN1Q9BSH3 213 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 PIPOXQ9P0Z9 390 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 STEAP1Q9UHE8 339 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 DNAH7Q8WXX0 4024 aa11.24□□□□□ -0.61
COL2A1-209ENST00000546974 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 NBR2O15453 112 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 BPNT1O95861 308 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
COL2A1-209ENST00000546974 CNTFRP26992 372 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
COL2A1-209ENST00000546974 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
COL2A1-209ENST00000546974 OR3A3P47888 321 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 CD69Q07108 199 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 LIPKQ5VXJ0 399 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 UFD1Q92890 307 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 IFI27L2Q9H2X8 130 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 OR51J1Q9H342 316 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
COL2A1-209ENST00000546974 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
COL2A1-209ENST00000546974 A0A0A6YYD4 124 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 ITGB1BP1O14713 200 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 RAB29O14966 203 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 NDUFA3O95167 84 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 TPBGQ13641 420 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 FHL3Q13643 280 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 TRAM1Q15629 374 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 MOB1BQ7L9L4 216 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 IL1F10Q8WWZ1 152 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 URM1Q9BTM9 101 aaKnown RBP11.22□□□□□ -0.61
COL2A1-209ENST00000546974 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 GHITMQ9H3K2 345 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 KCNK15Q9H427 330 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 CHMP1AQ9HD42 196 aaPredicted RBP11.22□□□□□ -0.61
COL2A1-209ENST00000546974 ISYNA1Q9NPH2 558 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 KIAA1456Q9P272 454 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms