RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 WDR54Q9H977 334 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 RBFOX1Q9NWB1 397 aaKnown RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 PSG11Q9UQ72 335 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 ZNF257Q9Y2Q1 563 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 TACC2O95359 2948 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 MPDZO75970 2070 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 MED12LQ86YW9 2145 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 IGKV1-27A0A075B6S5 117 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 IGHV1-45A0A0A0MS14 117 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 A0A0B4J2E0 115 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 C9J4A7 227 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 KRBOX1C9JBD0 128 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 PRMT5O14744 637 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 ENSAO43768 121 aaKnown RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 BANF1O75531 89 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 REM1O75628 298 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 APCSP02743 223 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 OR56A5P0C7T3 313 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 IVDP26440 423 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 IMPA1P29218 277 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 MAGEA3P43357 314 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 BLVRAP53004 296 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 OR2B8PP59922 312 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 MRPS15P82914 257 aaKnown RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 LOXL1Q08397 574 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 MAD2L1BPQ15013 274 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 TRIP13Q15645 432 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 PTRHD1Q6GMV3 140 aaKnown RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 CALHM1Q8IU99 346 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 LGI3Q8N145 548 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 DNAAF3Q8N9W5 541 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 OR4K5Q8NGD3 323 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 CD200R1Q8TD46 325 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 CENPNQ96H22 339 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 ZNF414Q96IQ9 312 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 KIFC1Q9BW19 673 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 OSBPL11Q9BXB4 747 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 NSRP1Q9H0G5 558 aaKnown RBP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 HDHD2Q9H0R4 259 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 HMG20AQ9NP66 347 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 ZNF355PQ9NSJ1 428 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 CES1P1Q9UKY3 287 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 CBY1Q9Y3M2 126 aa2.3□□□□□ -2.04
SCFD1-207ENST00000544052 PUS1Q9Y606 427 aaKnown RBP eCLIP2.3□□□□□ -2.04
SCFD1-207ENST00000544052 SPG11Q96JI7 2443 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ARID1AO14497 2285 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 MIF4GDA9UHW6 222 aaKnown RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 KLRC4-KLRK1H3BQV0 150 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SERPINB7O75635 380 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 YIF1AO95070 293 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 GCGP01275 180 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ADRA2AP08913 450 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SLC35E2BP0CK96 405 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 HLA-GP17693 338 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 IL1RNP18510 177 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TALDO1P37837 337 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 COILP38432 576 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 MNAT1P51948 309 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 C2orf80Q0P641 193 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TPBGQ13641 420 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SPA17Q15506 151 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 VAMP3Q15836 100 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 MPV17L2Q567V2 206 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 PAGE2Q7Z2X7 111 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 CPNE9Q8IYJ1 553 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 RPRMLQ8N4K4 120 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ACBD4Q8NC06 268 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 LGALS14Q8TCE9 139 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 CDKL2Q92772 493 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 GHSRQ92847 366 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TSLPQ969D9 159 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 OR4K3Q96R72 315 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SELENOSQ9BQE4 189 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 FBXO6Q9NRD1 293 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TMEM100Q9NV29 134 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TAC3Q9UHF0 121 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 CYB5R1Q9UHQ9 305 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 C3orf18Q9UK00 162 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 OR51B2Q9Y5P1 312 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ACANP16112 2415 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ANK3Q12955 4377 aaKnown RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ZNF860A6NHJ4 632 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SLC22A5O76082 557 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SERPINA7P05543 415 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 LOXP28300 417 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 TBPL1P62380 186 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 SLC35B1P78383 322 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 BASP1P80723 227 aaKnown RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 PRDX1Q06830 199 aaKnown RBP2.29□□□□□ -2.04
SCFD1-207ENST00000544052 OR1Q1Q15612 314 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 LINC00483Q53H64 154 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 C5orf47Q569G3 176 aa2.29□□□□□ -2.04
SCFD1-207ENST00000544052 ZNF684Q5T5D7 378 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms