RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 FAM210BQ96KR6 192 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 NOL4LQ96MY1 436 aaPredicted RBP4.53□□□□□ -1.69
PROM1-220ENST00000540805 KCNK17Q96T54 332 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 HIPK2Q9H2X6 1198 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 NAA60Q9H7X0 242 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 GNB4Q9HAV0 340 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 SERTAD4Q9NUC0 356 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 FOXJ2Q9P0K8 574 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 WSB1Q9Y6I7 421 aa4.53□□□□□ -1.69
PROM1-220ENST00000540805 A0A1W2PQD3 144 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ALG1L2C9J202 215 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 HSPB1P04792 205 aaKnown RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 CELA2AP08217 269 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR5AC1P0C628 307 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FAHP16930 419 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 HNF1AP20823 631 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FUT3P21217 361 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 EWSR1Q01844 656 aaKnown RBP eCLIP4.52□□□□□ -1.69
PROM1-220ENST00000540805 TMEM187Q14656 261 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PMS2CLQ68D20 193 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SPSB3Q6PJ21 355 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OGFOD3Q6PK18 319 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FAM89BQ8N5H3 189 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 CYB561D1Q8N8Q1 229 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ST6GALNAC3Q8NDV1 305 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR8B12Q8NGG6 310 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR10S1Q8NGN2 331 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR2AE1Q8NHA4 323 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 EXTL1Q92935 676 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PCED1AQ9H1Q7 454 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZNF391Q9UJN7 358 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 IGHV5-10-1A0A0J9YXX1 117 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 NKX6-3A6NJ46 265 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 CCL25O15444 150 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SPINT2O43291 252 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 CLDN1O95832 211 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ATP6V0CP27449 155 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 MAGEA5P43359 124 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SP6Q3SY56 376 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZNF506Q5JVG8 444 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 RHBDD2Q6NTF9 364 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 LYZL2Q7Z4W2 148 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 CALHM1Q8IU99 346 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR10D3Q8NH80 312 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PINX1Q96BK5 328 aaKnown RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 RAB9BQ9NP90 201 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FOXD3Q9UJU5 478 aaPredicted RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZGRF1Q86YA3 2104 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 A0A1W2PPV4 95 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FOXI3A8MTJ6 420 aaPredicted RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 B4DEV8 164 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 MS4A18H0YCH9 400 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 K7ESF4 209 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 DVL1O14640 695 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 RER1O15258 196 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZNF728P0DKX0 622 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR5H8P0DN80 308 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SRP14P37108 136 aaKnown RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR3A1P47881 315 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZNF121P58317 390 aaPredicted RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 HLA-DRB3P79483 266 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZP4Q12836 540 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PRDX4Q13162 271 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ICAM4Q14773 271 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 MS4A18Q3C1V0 323 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 LIAT1Q6ZQX7 453 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 DOK3Q7L591 496 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 LGI3Q8N145 548 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SLC25A45Q8N413 288 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SLC35G3Q8N808 338 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SLC38A9Q8NBW4 561 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 OR52M1Q8NGK5 317 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PTPMT1Q8WUK0 201 aaPredicted RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 RTN4IP1Q8WWV3 396 aaPredicted RBP4.52□□□□□ -1.69
PROM1-220ENST00000540805 WFDC12Q8WWY7 111 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ST8SIA1Q92185 356 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 RAB24Q969Q5 203 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 MRGPRX4Q96LA9 322 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 RASL10BQ96S79 203 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 FOXB1Q99853 325 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 ZNF581Q9P0T4 197 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 PITPNC1Q9UKF7 332 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 KIAA1549Q9HCM3 1950 aa4.52□□□□□ -1.69
PROM1-220ENST00000540805 M0R143 59 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PITX3O75364 302 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PNLIPP16233 465 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 KITLGP21583 273 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PAX5Q02548 391 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 CATR1Q13166 79 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 JOSD1Q15040 202 aaPredicted RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 SHBQ15464 509 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C1orf185Q5T7R7 199 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 BRICD5Q6PL45 260 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 ANKRD37Q7Z713 158 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 WDFY1Q8IWB7 410 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C11orf42Q8N5U0 333 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 OR10X1Q8NGY0 326 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms