RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OR10J5Q8NHC4 309 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 NEK7Q8TDX7 302 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 CLDN23Q96B33 292 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 MED12Q93074 2177 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 RAC3P60763 192 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 FOXB1Q99853 325 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 ATG101Q9BSB4 218 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 SRXN1Q9BYN0 137 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 PCED1AQ9H1Q7 454 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 LOC400499M0QZD8 3231 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 FAM90A26D6RGX4 464 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 GYPAP02724 150 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 PATE4P0C8F1 98 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 BATF2Q8N1L9 274 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 CADM4Q8NFZ8 388 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 IGKV1-39P01597 117 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 CRYABP02511 175 aaKnown RBP14.97□□□□□ -0.01
RAB40C-205ENST00000539661 IGKV1D-39P04432 117 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 OR10J1P30954 320 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 SLC38A11Q08AI6 406 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 DCAF10Q5QP82 559 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 RIPPLY2Q5TAB7 128 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-205ENST00000539661 MKXQ8IYA7 352 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 OR6C1Q96RD1 312 aa14.97□□□□□ -0.01
RAB40C-205ENST00000539661 NPIPB11E5RHQ5 1161 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 IGKV1D-33P01593 117 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 IGKV1-33P01594 117 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 SFTPCP11686 197 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 CD99P14209 185 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 GNB2P62879 340 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 EML6Q6ZMW3 1958 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 TRAPPC2LH3BP13 241 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 SCGB1D1O95968 90 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 RTP5Q14D33 572 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 ATP6V1FQ16864 119 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 IZUMO4Q1ZYL8 232 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 FAM180AQ6UWF9 173 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 COLCA1Q6ZS62 124 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 OR10V1Q8NGI7 309 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 CBLN4Q9NTU7 201 aa14.96□□□□□ -0.01
RAB40C-205ENST00000539661 ERRFI1Q9UJM3 462 aaPredicted RBP14.96□□□□□ -0.01
RAB40C-205ENST00000539661 CHD3Q12873 2000 aaKnown RBP14.96□□□□□ -0.01
RAB40C-205ENST00000539661 UBE2L5PA0A1B0GUS4 154 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 DEGS1O15121 323 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 IGKV1-5P01602 117 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 BTNL3Q6UXE8 466 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 TMEM14EPQ6UXP3 125 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 AAED1Q7RTV5 226 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 OR4F5Q8NH21 305 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 NEIL1Q96FI4 390 aaPredicted RBP14.96□□□□□ -0.02
RAB40C-205ENST00000539661 OR4F4Q96R69 305 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 NAGKQ9UJ70 344 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 RARRES3Q9UL19 164 aa14.96□□□□□ -0.02
RAB40C-205ENST00000539661 POLR3KQ9Y2Y1 108 aaPredicted RBP14.96□□□□□ -0.02
RAB40C-205ENST00000539661 G0S2P27469 103 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 SPANXN5Q5MJ07 72 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 ALKBH3Q96Q83 286 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-205ENST00000539661 PROK2Q9HC23 129 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 TMEM9BQ9NQ34 198 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 FRYQ5TBA9 3013 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 ZNF716A6NP11 495 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 NTF4P34130 210 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 RPL15P61313 204 aaKnown RBP14.95□□□□□ -0.02
RAB40C-205ENST00000539661 GAGE1Q13065 139 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 TESK1Q15569 626 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 CEACAM16Q2WEN9 425 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 CEACAM21Q3KPI0 293 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 FGFBP3Q8TAT2 258 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 LIN7CQ9NUP9 197 aaKnown RBP14.95□□□□□ -0.02
RAB40C-205ENST00000539661 MTCH1Q9NZJ7 389 aa14.95□□□□□ -0.02
RAB40C-205ENST00000539661 MMP7P09237 267 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-205ENST00000539661 CCL3P10147 92 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 HS3ST6Q96QI5 342 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 LAMA5O15230 3695 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 TNRC6BQ9UPQ9 1833 aaKnown RBP14.94□□□□□ -0.02
RAB40C-205ENST00000539661 HSPB6O14558 160 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 CBR3O75828 277 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 ZNF25P17030 456 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-205ENST00000539661 ZNF468Q5VIY5 522 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-205ENST00000539661 ACSM6Q6P461 480 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 ZDHHC23Q8IYP9 409 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 SLC25A45Q8N413 288 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 OR56B2PQ8NGI1 322 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 FSCN3Q9NQT6 498 aa14.94□□□□□ -0.02
RAB40C-205ENST00000539661 CFAP47Q6ZTR5 3102 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-205ENST00000539661 MLNRO43193 412 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 PCOLCEQ15113 449 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 PSMF1Q92530 271 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 FGF23Q9GZV9 251 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-205ENST00000539661 GPR35Q9HC97 309 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 WNT16Q9UBV4 365 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 KIAA2026Q5HYC2 2103 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 MARCH11A6NNE9 402 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 IL3RAP26951 378 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 GPM6AP51674 278 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 CLEC12BQ2HXU8 276 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 NRN1LQ496H8 165 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms