RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 CCSO14618 274 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 HSD17B6O14756 317 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ARPC5O15511 151 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF737O75373 536 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 RP2O75695 350 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 MPC2O95563 127 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 CDS2O95674 445 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 HBZP02008 142 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 SERPINE2P07093 398 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 EGR1P18146 543 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 PPOXP50336 477 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 P2RX3P56373 397 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 EDDM3BP56851 147 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 EDDM3AQ14507 147 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF345Q14585 488 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 OPCMLQ14982 345 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 IAH1Q2TAA2 248 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 CR1LQ2VPA4 569 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 HFEQ30201 348 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 THOC7Q6I9Y2 204 aaKnown RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 Q6ZPA2 131 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF818PQ6ZRF7 136 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ACOT7LQ6ZUV0 252 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 LDLRAD3Q86YD5 345 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 MUC15Q8N387 334 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF645Q8N7E2 425 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 OR11H4Q8NGC9 324 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 OR8H1Q8NGG4 311 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 RAB1BQ9H0U4 201 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 LIME1Q9H400 295 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 OR2S2Q9NQN1 319 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 FAM212BQ9NTI7 297 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 LIN7CQ9NUP9 197 aaKnown RBP8.56□□□□□ -1.04
HDAC3-214ENST00000495485 JPT1Q9UK76 154 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 KCNS2Q9ULS6 477 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF729A6NN14 1252 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 C12orf77C9JDV5 145 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM178BH3BS89 294 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 SIGLEC5O15389 551 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 PGLYRP1O75594 196 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 ADAP1O75689 374 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 FSTL3O95633 263 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 CYB5R3P00387 301 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 DANCRP0C864 163 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 PVALBP20472 110 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 F2RP25116 425 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 CD80P33681 288 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 GLIPR1P48060 266 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 RAB7AP51149 207 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 RAB14P61106 215 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 MEF2CQ06413 473 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 LRRC37A5PQ49AS3 106 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 LRRC10Q5BKY1 277 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 GGNBP1Q5YKI7 109 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 STUMQ69YW2 141 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 HIST2H2BCQ6DN03 193 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 PRSS54Q6PEW0 395 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF788Q6ZQV5 615 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 OR10A7Q8NGE5 316 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 RBPMSQ93062 196 aaKnown RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 COQ2Q96H96 371 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 ABHD14BQ96IU4 210 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM56Q96MV1 263 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 CCL19Q99731 98 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 ARL6Q9H0F7 186 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 BARX1Q9HBU1 254 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-214ENST00000495485 PLSCR3Q9NRY6 295 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 CBLN4Q9NTU7 201 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM106BQ9NUM4 274 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 LAMP3Q9UQV4 416 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM56-RWDD3S4R434 201 aa8.55□□□□□ -1.04
HDAC3-214ENST00000495485 IGHV3OR15-7A0A075B7D8 119 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 A0A1B0GW55 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 ITGB1BP1O14713 200 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 NDUFB3O43676 98 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 YPEL1O60688 119 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 OR8U9P0C7N5 309 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 VDAC1P21796 283 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 UCP1P25874 307 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 IFITM2Q01629 132 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms