RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
CTDSP1-212ENST00000494067 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
CTDSP1-212ENST00000494067 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
CTDSP1-212ENST00000494067 DNAH9Q9NYC9 4486 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 A0A0A6YYD4 124 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 WI2-2373I1.2A0A1W2PRP0 233 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 PTGES3LE9PB15 166 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 RPLP1P05386 114 aaKnown RBP10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 RANBP1P43487 201 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 F2RL1P55085 397 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 AQP4P55087 323 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 UNC119Q13432 240 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 LSAMPQ13449 338 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 IRF3Q14653 427 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 FAM71E2Q8N5Q1 922 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 OR2AK2Q8NG84 335 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 OR52L2PQ8NGH6 319 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 PHYHIPQ92561 330 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 RITA1Q96K30 269 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 SULT4A1Q9BR01 284 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 TMED9Q9BVK6 235 aa10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTDSP1-212ENST00000494067 IGHG4P01861 327 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 IGF1P05019 195 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 CHATP28329 748 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 HTR2CP28335 458 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 PPP1CCP36873 323 aaKnown RBP10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 QRFPP83859 136 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 SPHARQ15513 63 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 MED22Q15528 200 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 HSD17B12Q53GQ0 312 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 C9orf66Q5T8R8 295 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 RNLSQ5VYX0 342 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 CEACAM19Q7Z692 300 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 IL1F10Q8WWZ1 152 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 URM1Q9BTM9 101 aaKnown RBP10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 PLEKHJ1Q9NW61 149 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 PIPOXQ9P0Z9 390 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
CTDSP1-212ENST00000494067 NBR2O15453 112 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 BPNT1O95861 308 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 CD37P11049 281 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 SLC2A2P11168 524 aaPredicted RBP10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 SNRPBP14678 240 aaKnown RBP10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 SRMP19623 302 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 MYF6P23409 242 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 CNTFRP26992 372 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 ACTBP60709 375 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 RPS27AP62979 156 aaKnown RBP10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 CFHR3Q02985 330 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 C1orf100Q5SVJ3 147 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 LIN54Q6MZP7 749 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 TMEM91Q6ZNR0 172 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 C6orf201Q7Z4U5 140 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 RNF152Q8N8N0 203 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 UFD1Q92890 307 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 KCTD7Q96MP8 289 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 FAAP24Q9BTP7 215 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 PARP12Q9H0J9 701 aaKnown RBP10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 RIMS4Q9H426 269 aaPredicted RBP10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 MGAT4AQ9UM21 535 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 TPRKBQ9Y3C4 175 aa10.49□□□□□ -0.73
CTDSP1-212ENST00000494067 RAB29O14966 203 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 BLVRBP30043 206 aaPredicted RBP10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 RPS25P62851 125 aaKnown RBP10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 HMGN3Q15651 99 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 FAM71F2Q6NXP2 309 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 OR6M1Q8NGM8 313 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 NABP2Q9BQ15 211 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 MRPL20Q9BYC9 149 aaKnown RBP10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 GHITMQ9H3K2 345 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 PLGRKTQ9HBL7 147 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 PARP11Q9NR21 331 aa10.48□□□□□ -0.73
CTDSP1-212ENST00000494067 TMEM14DPA8MWL7 114 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 SEC14L6B5MCN3 397 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 SLC22A1O15245 554 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 HSPA12AO43301 675 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 UCHL1P09936 223 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 ARSBP15848 533 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 PSMB8P28062 276 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 MC5RP33032 325 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 OR3A3P47888 321 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 PLA2G7Q13093 441 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 PLGLAQ15195 96 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 TRAM1Q15629 374 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 LIPKQ5VXJ0 399 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 ZNF833PQ6ZTB9 187 aa10.47□□□□□ -0.73
CTDSP1-212ENST00000494067 OR11H1Q8NG94 326 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms