RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 ZNF554Q86TJ5 538 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 NR2C2APQ86WQ0 139 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
GABPA-203ENST00000487266 MRPL20Q9BYC9 149 aaKnown RBP12.54□□□□□ -0.4
GABPA-203ENST00000487266 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 SAA2-SAA4A0A096LPE2 208 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 FGF16O43320 207 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
GABPA-203ENST00000487266 HTD2P86397 168 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 LSAMPQ13449 338 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 MOGAT2Q3SYC2 334 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
GABPA-203ENST00000487266 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 Q8N9W7 124 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 GALMQ96C23 342 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 PECRQ9BY49 303 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 IFI27L2Q9H2X8 130 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 OR1A1Q9P1Q5 309 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 STEAP1Q9UHE8 339 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
GABPA-203ENST00000487266 TRDV1A0A1B0GX56 115 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 PSMB11A5LHX3 300 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 SERPINE3A8MV23 424 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 TXNL1O43396 289 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 YPEL1O60688 119 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 MOSP00540 346 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 PRB2P02812 416 aaPredicted RBP12.52□□□□□ -0.41
GABPA-203ENST00000487266 MYL9P24844 172 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 CD1BP29016 333 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 F2RL1P55085 397 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 HLA-DRB3P79483 266 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 SAMD5Q5TGI4 173 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 C18orf65Q6ZTR6 163 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 OR4F17Q8NGA8 305 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 OR4F4Q96R69 305 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 HSPB9Q9BQS6 159 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 Q9H521 79 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 ABRACLQ9P1F3 81 aa12.52□□□□□ -0.41
GABPA-203ENST00000487266 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 IFITM5A6NNB3 132 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 LANCL1O43813 399 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 IGHG2P01859 326 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 SLC2A2P11168 524 aaPredicted RBP12.51□□□□□ -0.41
GABPA-203ENST00000487266 CNTFRP26992 372 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 GPR12P47775 334 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 ZNF833PQ6ZTB9 187 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 OR2AK2Q8NG84 335 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 RITA1Q96K30 269 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 S1PR3Q99500 378 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 C12orf4Q9NQ89 552 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 SLC23A1Q9UHI7 598 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 HSF4Q9ULV5 492 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
GABPA-203ENST00000487266 TSSC4Q9Y5U2 329 aaPredicted RBP12.51□□□□□ -0.41
GABPA-203ENST00000487266 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 PDCD5O14737 125 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 MRPS14O60783 128 aaKnown RBP12.5□□□□□ -0.41
GABPA-203ENST00000487266 RGS11O94810 467 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 SCTP09683 121 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 PF4V1P10720 104 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 RAB3BP20337 219 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 STEAP3Q658P3 488 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 STPG2Q8N412 459 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 ABHD14BQ96IU4 210 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 NABP2Q9BQ15 211 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 ABCG5Q9H222 651 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 Q9N2K0 584 aa12.5□□□□□ -0.41
GABPA-203ENST00000487266 LIN7CQ9NUP9 197 aaKnown RBP12.5□□□□□ -0.41
GABPA-203ENST00000487266 A0A075B6Q4 140 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 IGKV1-6A0A0C4DH72 117 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 GNB3P16520 340 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 ZNF773Q6PK81 442 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 GLDNQ6ZMI3 551 aaPredicted RBP12.49□□□□□ -0.41
GABPA-203ENST00000487266 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 OR56B1Q8NGI3 324 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 MAFIPQ8WZ33 124 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
GABPA-203ENST00000487266 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 TXNL4BQ9NX01 149 aaKnown RBP12.49□□□□□ -0.41
GABPA-203ENST00000487266 RAB22AQ9UL26 194 aa12.49□□□□□ -0.41
GABPA-203ENST00000487266 RRP15Q9Y3B9 282 aaKnown RBP12.49□□□□□ -0.41
GABPA-203ENST00000487266 CD3GP09693 182 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 PSMD7P51665 324 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 ACTBP60709 375 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms