RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	SSBP1	Q04837	148 aa	Known RBP	10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	BAK1	Q16611	211 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGSF11	Q5DX21	431 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	C16orf87	Q6PH81	154 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	BRD3OS	Q6XYD6	125 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991		Q8N7P7	452 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR52L2P	Q8NGH6	319 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR5H2	Q8NGV7	314 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	PRDM13	Q9H4Q3	707 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	SIRT7	Q9NRC8	400 aa		10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	RBMX2	Q9Y388	322 aa	Known RBP	10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	PRKDC	P78527	4128 aa	Known RBP	10.64	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGKV1-6	A0A0C4DH72	117 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	FAM172BP	A6NC97	362 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	ZNF736	B4DX44	427 aa	Predicted RBP	10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	F2RL2	O00254	374 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	HSPA12A	O43301	675 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	PMP2	P02689	132 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	RBP4	P02753	201 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	CRYBA1	P05813	215 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	CSF1	P09603	554 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGHV1-8	P0DP01	117 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	IL7	P13232	177 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR3A3	P47888	321 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	DLX1	P56177	255 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	TAS2R46	P59540	309 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	PRB3	Q04118	309 aa	Predicted RBP	10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	MIDN	Q504T8	468 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	ZNF57	Q68EA5	555 aa	Predicted RBP	10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	HEPN1	Q6WQI6	88 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	VMO1	Q7Z5L0	202 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	LYSMD2	Q8IV50	215 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	C11orf42	Q8N5U0	333 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	TMEM86B	Q8N661	226 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	TMEM229B	Q8NBD8	167 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR5AP2	Q8NGF4	316 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR10V1	Q8NGI7	309 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	TRIM63	Q969Q1	353 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	CCDC32	Q9BV29	185 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	LINC00574	Q9H8X3	128 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	TAS2R8	Q9NYW2	309 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR1A1	Q9P1Q5	309 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	GNG12	Q9UBI6	72 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	SLC23A1	Q9UHI7	598 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	SESN1	Q9Y6P5	492 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	WNK1	Q9H4A3	2382 aa		10.63	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGHV1-69D	A0A0B4J2H0	117 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	CENPVL3	A0A0U1RRI6	287 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	LINC00854	A0A1B0GVQ3	168 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991		M0QYG6	137 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGHV1-69	P01742	117 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	IGHV3-7	P01780	117 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	CD3D	P04234	171 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	CTXN2	P0C2S0	81 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	HRH1	P35367	487 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	TAS2R19	P59542	299 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	AP3S2	P59780	193 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	HTD2	P86397	168 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	GNMT	Q14749	295 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	HERPUD1	Q15011	391 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	CDK10	Q15131	360 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	DEFB112	Q30KQ8	113 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	TMEM30B	Q3MIR4	351 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	RUSC1-AS1	Q66K80	236 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	C1orf122	Q6ZSJ8	110 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	TOMM5	Q8N4H5	51 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR10A7	Q8NGE5	316 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR10J5	Q8NHC4	309 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	LEAP2	Q969E1	77 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	GINS4	Q9BRT9	223 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	CABLES2	Q9BTV7	478 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	METTL8	Q9H825	291 aa	Known RBP	10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR2S2	Q9NQN1	319 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	ABCB10	Q9NRK6	738 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	NECAP2	Q9NVZ3	263 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	GFOD1	Q9NXC2	390 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991	EHF	Q9NZC4	300 aa		10.62	□□□□□ -0.71
NR1H3-223	ENST00000486991		A0A1B0GUS0	222 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	ANKRD20A5P	A0PJZ0	165 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	HOXA3	O43365	443 aa	Predicted RBP	10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	RAB3D	O95716	219 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	AKAIN1	P0CW23	69 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	ZBTB25	P24278	435 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	COX7A1	P24310	79 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	PPP1CC	P36873	323 aa	Known RBP	10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	CEACAM6	P40199	344 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	RFX2	P48378	723 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	KLRD1	Q13241	179 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	ACTBL2	Q562R1	376 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	RNASE10	Q5GAN6	216 aa	Known RBP	10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	STEAP3	Q658P3	488 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	STEAP1B	Q6NZ63	245 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991		Q6YL49	198 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	OR52M1	Q8NGK5	317 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	SSMEM1	Q8WWF3	244 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	LHX4	Q969G2	390 aa		10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.61	□□□□□ -0.71
NR1H3-223	ENST00000486991	TMEM133	Q9H2Q1	129 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 75 ms