RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FAM201AQ5SY85 155 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 KDF1Q8NAX2 398 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 MRGPRDQ8TDS7 321 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 MS4A7Q9GZW8 240 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 TAS2R3Q9NYW6 316 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 POMT1Q9Y6A1 747 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 DIDO1Q9BTC0 2240 aaKnown RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 DSCAML1Q8TD84 2053 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 COL6A6A6NMZ7 2263 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 MEX3AA1L020 520 aaKnown RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 OR4A8P0C604 315 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 NMSQ5H8A3 153 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 UNQ6494/PRO21346Q6UXR6 183 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 DMBX1Q8NFW5 382 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 ZCCHC14Q8WYQ9 949 aaKnown RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 GALMQ96C23 342 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 BSCL2Q96G97 398 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-205ENST00000466192 SPIN2AQ99865 258 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 SPIN2BQ9BPZ2 258 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 PKDREJQ9NTG1 2253 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 CACNA1AO00555 2505 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 HBZP02008 142 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 SERPINE2P07093 398 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 NKX2-1P43699 371 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-205ENST00000466192 B2MP61769 119 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 GNMTQ14749 295 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 FAM53AQ6NSI3 398 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-205ENST00000466192 OR13A1Q8NGR1 328 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 RNF141Q8WVD5 230 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 DUXBA0A1W2PPF3 345 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 CCL21O00585 134 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 FGF16O43320 207 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 IL2RGP31785 369 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 ASCL1P50553 236 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 POLR2GP62487 172 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL9A3-205ENST00000466192 PAX5Q02548 391 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 CXorf66Q5JRM2 361 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-205ENST00000466192 OR1S2Q8NGQ3 325 aa15.25■□□□□ 0.03
COL9A3-205ENST00000466192 SEBOXQ9HB31 216 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-205ENST00000466192 NXPH3O95157 252 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 ZNF16P17020 682 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-205ENST00000466192 CD80P33681 288 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 P2RY1P47900 373 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 EIF5AP63241 154 aaKnown RBP15.24■□□□□ 0.03
COL9A3-205ENST00000466192 EDDM3AQ14507 147 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 OR52L2PQ8NGH6 319 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 DCTN5Q9BTE1 182 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 MAGT1Q9H0U3 335 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 ESRP2Q9H6T0 727 aaKnown RBP15.24■□□□□ 0.03
COL9A3-205ENST00000466192 RNF7Q9UBF6 113 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 TANC2Q9HCD6 1990 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 GPR137BO60478 399 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 FBXO24O75426 580 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 JTBO76095 146 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 FAM157CP0CG43 387 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 TNFSF4P23510 183 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 SSTR5P35346 364 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 NHLH2Q02577 135 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 TGIF2LYQ8IUE0 185 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 STPG2Q8N412 459 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 ZNRF1Q8ND25 227 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 IL22RA2Q969J5 263 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 PRORYQ9H606 182 aa15.24■□□□□ 0.03
COL9A3-205ENST00000466192 USF3Q68DE3 2245 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 CYB5R3P00387 301 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-205ENST00000466192 GPR157Q5UAW9 335 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 ZCCHC24Q8N2G6 241 aaKnown RBP15.23■□□□□ 0.03
COL9A3-205ENST00000466192 FAM222BQ8WU58 562 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 AKR1E2Q96JD6 320 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 SNX22Q96L94 193 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 LURAP1Q96LR2 239 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 NGBQ9NPG2 151 aa15.23■□□□□ 0.03
COL9A3-205ENST00000466192 CLEC18AA5D8T8 446 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 ZNF705EA8MWA4 302 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-205ENST00000466192 NUPL2O15504 423 aaKnown RBP15.22■□□□□ 0.03
COL9A3-205ENST00000466192 SSSCA1O60232 199 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 GAPDHP04406 335 aaKnown RBP15.22■□□□□ 0.03
COL9A3-205ENST00000466192 EPHA1P21709 976 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 LY6DQ14210 128 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 DRAM1Q8N682 238 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 CLEC18CQ8NCF0 446 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 RNF150Q9ULK6 438 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 KLF2Q9Y5W3 355 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-205ENST00000466192 A0A0G2JRQ6 117 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 PCP4L1A6NKN8 68 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 SHISA9B4DS77 424 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 CCL8P80075 99 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 NCMAPQ5T1S8 102 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 DMRTC2Q8IXT2 367 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-205ENST00000466192 Q8TCH9 128 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 WFDC1Q9HC57 220 aa15.22■□□□□ 0.03
COL9A3-205ENST00000466192 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 C17orf100A8MU93 164 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 K7N7A8 449 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 MGST3O14880 152 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 CHRNB4P30926 498 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 CAV2P51636 162 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 IZUMO4Q1ZYL8 232 aa15.21■□□□□ 0.03
COL9A3-205ENST00000466192 EIF5AL1Q6IS14 154 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms