RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 EFNB2P52799 333 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 PPP5CP53041 499 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 HLA-DRB3P79483 266 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
VPS52-213ENST00000461743 LTC4SQ16873 150 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 PLAC9Q5JTB6 97 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 C11orf88Q6PI97 169 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 SLC7A5P1Q8MH63 180 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 ZNF439Q8NDP4 499 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 OR1L1Q8NH94 360 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 LGALS14Q8TCE9 139 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 AKR1E2Q96JD6 320 aa9.55□□□□□ -0.88
VPS52-213ENST00000461743 CMSS1Q9BQ75 279 aaKnown RBP9.55□□□□□ -0.88
VPS52-213ENST00000461743 A0A0B4J203 849 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 A0A1W2PPI3 338 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 CLPSL1A2RUU4 121 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 HSD17B6O14756 317 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 YPEL1O60688 119 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 CD3GP09693 182 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 KIR2DS4P43632 304 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 RELBQ01201 579 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 IFITM3Q01628 133 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 IFITM2Q01629 132 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 MXD1Q05195 221 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 PLA2G7Q13093 441 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 HABP2Q14520 560 aaPredicted RBP9.54□□□□□ -0.88
VPS52-213ENST00000461743 KIR2DS1Q14954 304 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 LY6EQ16553 131 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 SRSF7Q16629 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS52-213ENST00000461743 PLA1AQ53H76 456 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 OLFML2AQ68BL7 652 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 FAM71F2Q6NXP2 309 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 Q6ZSV7 163 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 PRR18Q8N4B5 295 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 DYNC2LI1Q8TCX1 351 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
VPS52-213ENST00000461743 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 ABHD14AQ9BUJ0 271 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 ZNF747Q9BV97 191 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 RNF167Q9H6Y7 350 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 Q9N2K0 584 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 OR2S2Q9NQN1 319 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 A3GALT2U3KPV4 340 aa9.54□□□□□ -0.88
VPS52-213ENST00000461743 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
VPS52-213ENST00000461743 IGHV3-43A0A0B4J1X8 118 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 SMIM30A4D0T7 59 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 M0QZK8 103 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 CHST1O43916 411 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 GAPDHP04406 335 aaKnown RBP9.53□□□□□ -0.88
VPS52-213ENST00000461743 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
VPS52-213ENST00000461743 IGHV3-43DP0DP04 118 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 MDKP21741 143 aaPredicted RBP9.53□□□□□ -0.88
VPS52-213ENST00000461743 DTYMKP23919 212 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 PAX6P26367 422 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 MOGAT2Q3SYC2 334 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 MORN2Q502X0 79 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 UTF1Q5T230 341 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 Q6ZPA2 131 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 Q6ZS49 121 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 IZUMO1Q8IYV9 350 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 OR2AK2Q8NG84 335 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 UBALD1Q8TB05 177 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 EDARADDQ8WWZ3 215 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 ATG5Q9H1Y0 275 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 GHITMQ9H3K2 345 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 SPATA2Q9UM82 520 aa9.53□□□□□ -0.88
VPS52-213ENST00000461743 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 OR2F2O95006 317 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 FCGR3AP08637 254 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 CLEC2LP0C7M8 214 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 FAM106CPP0CH98 169 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
VPS52-213ENST00000461743 GNB3P16520 340 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 PITPNAQ00169 270 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 PNLIPRP3Q17RR3 467 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 IDNKQ5T6J7 187 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 OR10V1Q8NGI7 309 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 OR4A4PQ8NGN8 299 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 LINC01006Q8NI28 216 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 SETD6Q8TBK2 473 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 CAPSLQ8WWF8 208 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 RTN4IP1Q8WWV3 396 aaPredicted RBP9.52□□□□□ -0.89
VPS52-213ENST00000461743 CFHR4Q92496 578 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 ST6GALNAC6Q969X2 333 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 SLC25A46Q96AG3 418 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 PHF21AQ96BD5 680 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 HDHD3Q9BSH5 251 aaPredicted RBP9.52□□□□□ -0.89
VPS52-213ENST00000461743 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 RBMX2Q9Y388 322 aaKnown RBP9.52□□□□□ -0.89
VPS52-213ENST00000461743 RNF114Q9Y508 228 aa9.52□□□□□ -0.89
VPS52-213ENST00000461743 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms