RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ZNRD1Q9P1U0 126 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 PSG11Q9UQ72 335 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 ANKRD20A5PA0PJZ0 165 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 ODF3BA8MYP8 253 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 INAFM1C9JVW0 142 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 J3QR06 171 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 J3QRK9 145 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 M0QYG6 137 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 NPFFO15130 113 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 SLC31A2O15432 143 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 RAB3DO95716 219 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 CD3DP04234 171 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 OR5H8P0DN80 308 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 TBPP20226 339 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 NFYAP23511 347 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 SAA4P35542 130 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 RFX2P48378 723 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 INPP1P49441 399 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 LGALS4P56470 323 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 LSAMPQ13449 338 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 BAK1Q16611 211 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 HLA-DRB5Q30154 266 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 ZNF57Q68EA5 555 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 STEAP1BQ6NZ63 245 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 LYSMD2Q8IV50 215 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 H1FOOQ8IZA3 346 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 ZNF439Q8NDP4 499 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 BEND2Q8NDZ0 799 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 OR10X1Q8NGY0 326 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 ZNF596Q8TC21 504 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 TINAGL1Q9GZM7 467 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 MS4A7Q9GZW8 240 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 MMP28Q9H239 520 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 ZNF107Q9UII5 783 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 NUP50Q9UKX7 468 aa8.28□□□□□ -1.08
UPF2-204ENST00000460569 AMMECR1Q9Y4X0 333 aaPredicted RBP8.28□□□□□ -1.08
UPF2-204ENST00000460569 ST8SIA5O15466 376 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 IGLV1-47P01700 117 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 CD74P04233 296 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 IFNA6P05013 189 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 AKAIN1P0CW23 69 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 IL7P13232 177 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 EPHA1P21709 976 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 AADACP22760 399 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 CD40LGP29965 261 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 FCGR2CP31995 323 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 RAB7AP51149 207 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 PPP5CP53041 499 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 AP3S2P59780 193 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 TSPAN5P62079 268 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 DYRK1AQ13627 763 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 MIDNQ504T8 468 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 CT45A1Q5HYN5 189 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 LY6G6FQ5SQ64 297 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 VAX1Q5SQQ9 334 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 FAAP20Q6NZ36 180 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 SLC25A48Q6ZT89 311 aaKnown RBP8.27□□□□□ -1.09
UPF2-204ENST00000460569 OVCH2Q7RTZ1 564 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 TOMM5Q8N4H5 51 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 LINC00311Q8N616 119 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 OR4D10Q8NGI6 311 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 OR4P4Q8NGL7 312 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 TSC22D3Q99576 134 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 CCDC32Q9BV29 185 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 BEX2Q9BXY8 128 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 C11orf54Q9H0W9 315 aaPredicted RBP8.27□□□□□ -1.09
UPF2-204ENST00000460569 CDC42EP3Q9UKI2 254 aa8.27□□□□□ -1.09
UPF2-204ENST00000460569 TBL2Q9Y4P3 447 aaKnown RBP8.27□□□□□ -1.09
UPF2-204ENST00000460569 RBM7Q9Y580 266 aaKnown RBP8.27□□□□□ -1.09
UPF2-204ENST00000460569 NSD1Q96L73 2696 aaPredicted RBP8.26□□□□□ -1.09
UPF2-204ENST00000460569 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 BUB1B-PAK6H3BSN5 160 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 ITGB1BP1O14713 200 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 TUSC2O75896 110 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 PPYP01298 95 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 AMY2AP04746 511 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 OR8U9P0C7N5 309 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 SRD5A1P18405 259 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 IL3RAP26951 378 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 HTR1DP28221 377 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 FAUP35544 74 aaKnown RBP8.26□□□□□ -1.09
UPF2-204ENST00000460569 CEACAM3P40198 252 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 ZNF134P52741 427 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 FXYD4P59646 89 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 BPIFB3P59826 476 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 HERV-K104P61576 105 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 KLF9Q13886 244 aaPredicted RBP8.26□□□□□ -1.09
UPF2-204ENST00000460569 MEF2DQ14814 521 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 TMEM17Q86X19 198 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 LYG1Q8N1E2 194 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 ARRDC1Q8N5I2 433 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 OR4C16Q8NGL9 310 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 OR8U1Q8NH10 309 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 C22orf15Q8WYQ4 148 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 CREB3L1Q96BA8 519 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 ABHD14BQ96IU4 210 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms