RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LINC00470Q9BZP3 86 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 OR2H2O95918 312 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 HOXA6P31267 233 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF665Q9H7R5 613 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 AKIRIN1Q9H9L7 192 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-206ENST00000445265 TRBV6-7A0A0A0MS04 114 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 H0YL77 283 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 DEFA4P12838 97 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 NTF3P20783 257 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 MYPOPQ86VE0 399 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-206ENST00000445265 A0A0A6YYD4 124 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 CRYABP02511 175 aaKnown RBP14.3□□□□□ -0.12
TCOF1-206ENST00000445265 KLK2P20151 261 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 CFHR1Q03591 330 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 FAM162BQ5T6X4 162 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 SLC23A3Q6PIS1 610 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 TMEM45BQ96B21 275 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 ACY3Q96HD9 319 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 TMEM56Q96MV1 263 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 CDX2Q99626 313 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-206ENST00000445265 RARRES2Q99969 163 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 YIF1AO95070 293 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 AESQ08117 197 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 LSM10Q969L4 123 aaKnown RBP14.3□□□□□ -0.12
TCOF1-206ENST00000445265 GPHA2Q96T91 129 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 DDA1Q9BW61 102 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 PRO1933Q9H354 126 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 NRN1LQ496H8 165 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 TMPRSS7Q7RTY8 843 aa14.3□□□□□ -0.12
TCOF1-206ENST00000445265 CCKARP32238 428 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 HIST1H3AP68431 136 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 MEF2BQ02080 365 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-206ENST00000445265 PPP1R32Q7Z5V6 425 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 MS4A10Q96PG2 267 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 CLN8Q9UBY8 286 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 MED12Q93074 2177 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 DMWDQ09019 674 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 RSPO4Q2I0M5 234 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-206ENST00000445265 TAF15Q92804 592 aaKnown RBP eCLIP14.29□□□□□ -0.12
TCOF1-206ENST00000445265 CNIH1O95406 144 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 GNG4P50150 75 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 MRPS11P82912 194 aaKnown RBP14.29□□□□□ -0.12
TCOF1-206ENST00000445265 SRSF4Q08170 494 aaKnown RBP14.29□□□□□ -0.12
TCOF1-206ENST00000445265 LHFPL1Q86WI0 220 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 OR10G8Q8NGN5 311 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 PLXND1Q9Y4D7 1925 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 DVL1O14640 695 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 EFNA2O43921 213 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
TCOF1-206ENST00000445265 EP400Q96L91 3159 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 COL4A6Q14031 1691 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 LOC102723996A0A087X1L8 192 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 BMP5P22003 454 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 UCP1P25874 307 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 GNG10P50151 68 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 C9orf152Q5JTZ5 239 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 FAM103A1Q9BTL3 118 aaKnown RBP14.28□□□□□ -0.12
TCOF1-206ENST00000445265 CLDN16Q9Y5I7 305 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 IGSF23A1L1A6 192 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 SHISA7A6NL88 538 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF891A8MT65 544 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-206ENST00000445265 C3orf80F5H4A9 247 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 EIF3GO75821 320 aaKnown RBP eCLIP14.28□□□□□ -0.12
TCOF1-206ENST00000445265 FGFRL1Q8N441 504 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 TMEM167BQ9NRX6 74 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 hADV38S2A0JD32 116 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 VMA21Q3ZAQ7 101 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF837Q96EG3 531 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-206ENST00000445265 SVILO95425 2214 aa14.28□□□□□ -0.12
TCOF1-206ENST00000445265 TNFAIP6P98066 277 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-206ENST00000445265 HABP2Q14520 560 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-206ENST00000445265 STPG1Q5TH74 334 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 OR4C12Q96R67 309 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 NAT8BQ9UHF3 227 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 NOTCH4Q99466 2003 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 UCP2P55851 309 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF880Q6PDB4 577 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF383Q8NA42 475 aa14.27□□□□□ -0.12
TCOF1-206ENST00000445265 METTL1Q9UBP6 276 aaKnown RBP14.27□□□□□ -0.12
TCOF1-206ENST00000445265 FCN1O00602 326 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 HBZP02008 142 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 TRGC2P03986 189 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 RFPL3SP0C7P2 107 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 CALHM1Q8IU99 346 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 C1QTNF5Q9BXJ0 243 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 CISD1Q9NZ45 108 aaKnown RBP14.27□□□□□ -0.13
TCOF1-206ENST00000445265 R4GN57 208 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 IGHV3-13P01766 116 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 IGHV3-7P01780 117 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 C1orf174Q8IYL3 243 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 ZNF645Q8N7E2 425 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 GAL3ST2Q9H3Q3 398 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 PLXNB3Q9ULL4 1909 aa14.27□□□□□ -0.13
TCOF1-206ENST00000445265 A0A087X0M5 115 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 A0A1B0GX30 115 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 GYPAP02724 150 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 FAM3BP58499 235 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-206ENST00000445265 KRTDAPP60985 99 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 BHLHA15Q7RTS1 189 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms