RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 YPEL2Q96QA6 119 aa13.92□□□□□ -0.18
NUP50-208ENST00000430547 GFI1Q99684 422 aa13.92□□□□□ -0.18
NUP50-208ENST00000430547 LPAR5Q9H1C0 372 aa13.92□□□□□ -0.18
NUP50-208ENST00000430547 RIMS4Q9H426 269 aaPredicted RBP13.92□□□□□ -0.18
NUP50-208ENST00000430547 Q9H521 79 aa13.92□□□□□ -0.18
NUP50-208ENST00000430547 V9GY05 133 aa13.92□□□□□ -0.18
NUP50-208ENST00000430547 ZNF736B4DX44 427 aaPredicted RBP13.91□□□□□ -0.18
NUP50-208ENST00000430547 AP4M1O00189 453 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 PDCD5O14737 125 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 NAPSAO96009 420 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 MYL9P24844 172 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 CLDN12P56749 244 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 GABARAPL2P60520 117 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 LSAMPQ13449 338 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 Q8N9W7 124 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 OR51D1Q8NGF3 324 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 FAM3DQ96BQ1 224 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 ABCG5Q9H222 651 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 LINC00527Q9UJ94 153 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 MGAT4AQ9UM21 535 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 NOTCH3Q9UM47 2321 aa13.91□□□□□ -0.18
NUP50-208ENST00000430547 TGP01266 2768 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 A0A0A6YYD4 124 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 SOCS1O15524 211 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
NUP50-208ENST00000430547 GPR12P47775 334 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 VEGFCP49767 419 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 OXLD1Q5BKU9 147 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 LY6G6FQ5SQ64 297 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 STPG2Q8N412 459 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 COMMD1Q8N668 190 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 OR56B1Q8NGI3 324 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 S1PR3Q99500 378 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 GON7Q9BXV9 100 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 C12orf4Q9NQ89 552 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 NDUFB11Q9NX14 153 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 AK3Q9UIJ7 227 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 HSF4Q9ULV5 492 aa13.9□□□□□ -0.18
NUP50-208ENST00000430547 NUDT19A8MXV4 375 aa13.89□□□□□ -0.19
NUP50-208ENST00000430547 MRPS14O60783 128 aaKnown RBP13.89□□□□□ -0.19
NUP50-208ENST00000430547 MRPS15P82914 257 aaKnown RBP13.89□□□□□ -0.19
NUP50-208ENST00000430547 MMDQ15546 238 aa13.89□□□□□ -0.19
NUP50-208ENST00000430547 SSX1Q16384 188 aa13.89□□□□□ -0.19
NUP50-208ENST00000430547 KPRPQ5T749 579 aaPredicted RBP13.89□□□□□ -0.19
NUP50-208ENST00000430547 HES5Q5TA89 166 aa13.89□□□□□ -0.19
NUP50-208ENST00000430547 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
NUP50-208ENST00000430547 SAA2-SAA4A0A096LPE2 208 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 HSPA12AO43301 675 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 DENRO43583 198 aaKnown RBP13.88□□□□□ -0.19
NUP50-208ENST00000430547 SAA2P0DJI9 122 aaPredicted RBP13.88□□□□□ -0.19
NUP50-208ENST00000430547 SOX6P35712 828 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 C2orf76Q3KRA6 126 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 ZNF880Q6PDB4 577 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 REC114Q7Z4M0 266 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 ODF3L1Q8IXM7 274 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 ARHGAP5-AS1Q96IT6 56 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 CMSS1Q9BQ75 279 aaKnown RBP13.88□□□□□ -0.19
NUP50-208ENST00000430547 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
NUP50-208ENST00000430547 MRPL20Q9BYC9 149 aaKnown RBP13.88□□□□□ -0.19
NUP50-208ENST00000430547 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 SLC23A1Q9UHI7 598 aa13.88□□□□□ -0.19
NUP50-208ENST00000430547 TRBV6-6A0A0A6YYG2 114 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 TRAV1-2A0A0B4J238 106 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 RAB29O14966 203 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 ST8SIA5O15466 376 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 ZBTB25P24278 435 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 OR3A3P47888 321 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 F2RL1P55085 397 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 RPL23AP62750 156 aaKnown RBP13.87□□□□□ -0.19
NUP50-208ENST00000430547 FAM71F2Q6NXP2 309 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 TEX38Q6PEX7 206 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 ZNF833PQ6ZTB9 187 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 FAM71E2Q8N5Q1 922 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 EDARADDQ8WWZ3 215 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 PHF21AQ96BD5 680 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 NABP2Q9BQ15 211 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 ZNF251Q9BRH9 671 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 PECRQ9BY49 303 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 PLSCR3Q9NRY6 295 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 ZFP57Q9NU63 452 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 RAB22AQ9UL26 194 aa13.87□□□□□ -0.19
NUP50-208ENST00000430547 TMEM272A0A1B0GTI8 110 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 TRDV1A0A1B0GX56 115 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 LINC01548A6NM66 108 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 SLC2A2P11168 524 aaPredicted RBP13.86□□□□□ -0.19
NUP50-208ENST00000430547 IGLL1P15814 213 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 RAB3BP20337 219 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 VDAC1P21796 283 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 GADD45AP24522 165 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 PSMB9P28065 219 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 SLC6A1P30531 599 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 ACTBP60709 375 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 PNLIPRP3Q17RR3 467 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 Q6ZPA2 131 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 KLHL30-AS1Q8NEE0 82 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 WFDC9Q8NEX5 89 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
NUP50-208ENST00000430547 IFI27L2Q9H2X8 130 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms