RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 HFEQ30201 348 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 LRRC37A5PQ49AS3 106 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 TCF23Q7RTU1 214 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 RFESDQ8TAC1 157 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 RAB9BQ9NP90 201 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 CALYQ9NYX4 217 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 KIAA2026Q5HYC2 2103 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 LRBAP50851 2863 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 KBTBD11-OT1A0A1B0GTJ5 212 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 DUXBA0A1W2PPF3 345 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 NDUFA2O43678 99 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 YPEL1O60688 119 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 C4BPBP20851 252 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
ACTB-204ENST00000425660 C17orf58Q2M2W7 97 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 IAH1Q2TAA2 248 aaPredicted RBP12.6□□□□□ -0.39
ACTB-204ENST00000425660 ZNF546Q86UE3 836 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 YPEL2Q96QA6 119 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 GPHA2Q96T91 129 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 CLN8Q9UBY8 286 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 TNFSF18Q9UNG2 199 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
ACTB-204ENST00000425660 RBM7Q9Y580 266 aaKnown RBP12.6□□□□□ -0.39
ACTB-204ENST00000425660 PIGBOS1A0A0B4J2F0 54 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 L7N2F9 121 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 TNFSF12O43508 249 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 LYL1P12980 280 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 SSTR2P30874 369 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 EIF4EBP1Q13541 118 aaPredicted RBP12.59□□□□□ -0.39
ACTB-204ENST00000425660 ZNF345Q14585 488 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 TMEM268Q5VZI3 342 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
ACTB-204ENST00000425660 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
ACTB-204ENST00000425660 SLC25A10Q9UBX3 287 aaPredicted RBP12.59□□□□□ -0.39
ACTB-204ENST00000425660 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 FCN3O75636 299 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 SOD3P08294 240 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 MEF2CQ06413 473 aaPredicted RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 MORN2Q502X0 79 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 THAP6Q8TBB0 222 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 RBPMSQ93062 196 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 RAB1BQ9H0U4 201 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 OR2D2Q9H210 308 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 KCNS2Q9ULS6 477 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 ZNF729A6NN14 1252 aaPredicted RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 H0YIZ8 118 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 ITGB1BP1O14713 200 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 RP2O75695 350 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 PET100P0DJ07 73 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 S100A11P31949 105 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 ESCO2Q56NI9 601 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 MEX3BQ6ZN04 569 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 SELENOHQ8IZQ5 122 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
ACTB-204ENST00000425660 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
ACTB-204ENST00000425660 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 IGHV3-43A0A0B4J1X8 118 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 RNF222A6NCQ9 220 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 IGHV3-43DP0DP04 118 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 VDAC1P21796 283 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 RAB32Q13637 225 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 TAS2R3Q9NYW6 316 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 GSKIPQ9P0R6 139 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 CTSZQ9UBR2 303 aa12.57□□□□□ -0.4
ACTB-204ENST00000425660 RNF212BA8MTL3 300 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 ADAM20O43506 726 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 OR2F2O95006 317 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 COL8A2P25067 703 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 OR2F1Q13607 317 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 OPCMLQ14982 345 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 LYPD2Q6UXB3 125 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 OR52M1Q8NGK5 317 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms