RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RTN4RQ9BZR6 473 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 SAP30LQ9HAJ7 183 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 NUP214P35658 2090 aaPredicted RBP10.46□□□□□ -0.74
UBR4-205ENST00000417040 ARFGEF1Q9Y6D6 1849 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 H3BTX0 84 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 CTAG1AP78358 180 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 NAAAQ02083 359 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 MIC13Q5XKP0 118 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 GLRX2Q9NS18 164 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 SYNGR1O43759 233 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 LIMS1P48059 325 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 RAC3P60763 192 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 RBPMS2Q6ZRY4 209 aaKnown RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 IGHV1OR15-9A0A0B4J2B8 117 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 HSPB1P04792 205 aaKnown RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 CDX1P47902 265 aaPredicted RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 OR8G5Q8NG78 346 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 ZNF721Q8TF20 911 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 IER2Q9BTL4 223 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 PIN1P1O15428 100 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 KLF7O75840 302 aaPredicted RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 PLPPR5Q32ZL2 321 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 C5orf66Q9H5L9 145 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 PCM1Q15154 2024 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 IGHV3-72A0A0B4J1Y9 119 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 SSPNQ14714 243 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 K7ERU9 68 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 UPK3AO75631 287 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 CD82P27701 267 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
UBR4-205ENST00000417040 ALX4Q9H161 411 aaPredicted RBP10.45□□□□□ -0.74
UBR4-205ENST00000417040 KLK10O43240 276 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 SSTR5P35346 364 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 C2orf68Q2NKX9 166 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 SNAI3Q3KNW1 292 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 MDP1Q86V88 176 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 AQP3Q92482 292 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 PTX4Q96A99 478 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 PRRC2BQ5JSZ5 2229 aaKnown RBP10.44□□□□□ -0.74
UBR4-205ENST00000417040 SNAI2O43623 268 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ASAH2BP0C7U1 165 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 SRIP30626 198 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 TDHQ8IZJ6 230 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ST6GALNAC6Q969X2 333 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 GPR146Q96CH1 333 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 IL19Q9UHD0 177 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 AMMECR1Q9Y4X0 333 aaPredicted RBP10.44□□□□□ -0.74
UBR4-205ENST00000417040 IGKV1-8A0A0C4DH67 115 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 AMY1AP04745 511 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 CELA2AP08217 269 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 CCL4P13236 92 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 RTP5Q14D33 572 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 CLEC1BQ9P126 229 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 KBTBD11O94819 623 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 LEMD1Q68G75 181 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 SF3B6Q9Y3B4 125 aaKnown RBP10.44□□□□□ -0.74
UBR4-205ENST00000417040 CLDN14O95500 239 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 FABP2P12104 132 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 HOXA4Q00056 320 aaPredicted RBP10.44□□□□□ -0.74
UBR4-205ENST00000417040 IL11RAQ14626 422 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ZPBPQ9BS86 351 aa10.44□□□□□ -0.74
UBR4-205ENST00000417040 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
UBR4-205ENST00000417040 LY75O60449 1722 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 FCARP24071 287 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 LGALS7P47929 136 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 LILRA6Q6PI73 481 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 WNT16Q9UBV4 365 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 HIGD1AQ9Y241 93 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 CACNA1CQ13936 2221 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 TRBV5-5A0A0J9YX44 114 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 PGLYRP1O75594 196 aaPredicted RBP10.43□□□□□ -0.74
UBR4-205ENST00000417040 RNASE1P07998 156 aaKnown RBP10.43□□□□□ -0.74
UBR4-205ENST00000417040 GFRA1P56159 465 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 VKORC1L1Q8N0U8 176 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 KIAA1217Q5T5P2 1943 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 FOXC1Q12948 553 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 C10orf35Q96D05 121 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 AREGP15514 252 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 OR10S1Q8NGN2 331 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 LEAP2Q969E1 77 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms