RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ADAM5Q6NVV9 412 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 HSD17B13Q7Z5P4 300 aaPredicted RBP17.28■□□□□ 0.36
USP39-203ENST00000409470 ZBTB34Q8NCN2 500 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 ANGPTL6Q8NI99 470 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 TOLLIPQ9H0E2 274 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 NGBQ9NPG2 151 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 A0A0G2JRQ6 117 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 ATXN7O15265 892 aaPredicted RBP17.28■□□□□ 0.36
USP39-203ENST00000409470 NXPH3O95157 252 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 CYB5R3P00387 301 aaPredicted RBP17.28■□□□□ 0.36
USP39-203ENST00000409470 VAMP2P63027 116 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 LTC4SQ16873 150 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 CCDC28AQ8IWP9 274 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 ZNF808Q8N4W9 903 aaPredicted RBP17.28■□□□□ 0.36
USP39-203ENST00000409470 GPR146Q96CH1 333 aa17.28■□□□□ 0.36
USP39-203ENST00000409470 BSCL2Q96G97 398 aaPredicted RBP17.28■□□□□ 0.36
USP39-203ENST00000409470 C15orf65H3BRN8 121 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 K7N7A8 449 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 WRBO00258 174 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 FGF16O43320 207 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 FGF2P09038 288 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 IRF2P14316 349 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 GZMHP20718 246 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 CAV2P51636 162 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 AKR1C2P52895 323 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 EDDM3BP56851 147 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 ID3Q02535 119 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 OR2C3Q8N628 320 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 TAS2R3Q9NYW6 316 aa17.27■□□□□ 0.36
USP39-203ENST00000409470 SPTBN4Q9H254 2564 aa17.27■□□□□ 0.35
USP39-203ENST00000409470 A0A1B0GU03 582 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 IGKV1-39P01597 117 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 IGKV1D-39P04432 117 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 HTD2P86397 168 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 DEFB108AA8MXU0 73 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 ADH4P08319 380 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 NHLH2Q02577 135 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 ZNF585BQ52M93 769 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 DEFB108BQ8NET1 73 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 FAM222BQ8WU58 562 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 LSM10Q969L4 123 aaKnown RBP17.26■□□□□ 0.35
USP39-203ENST00000409470 C11orf1Q9H5F2 150 aa17.26■□□□□ 0.35
USP39-203ENST00000409470 BORCS7-ASMTA0A0B4J1R7 106 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 FAM24AA6NFZ4 105 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 VSTM5A8MXK1 200 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 A8MXK9 166 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 LGALS8O00214 317 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 FBXO24O75426 580 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 SLC25A6P12236 298 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 CCL8P80075 99 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 EWSR1Q01844 656 aaKnown RBP eCLIP17.25■□□□□ 0.35
USP39-203ENST00000409470 ZNF561Q8N587 486 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 EIF4E3Q8N5X7 224 aaKnown RBP17.25■□□□□ 0.35
USP39-203ENST00000409470 Q8TCH9 128 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 DIRC2Q96SL1 478 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 ZNF705EA8MWA4 302 aaPredicted RBP17.25■□□□□ 0.35
USP39-203ENST00000409470 TNFRSF1AP19438 455 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 CA7P43166 264 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 IZUMO4Q1ZYL8 232 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 UBAC2Q8NBM4 344 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 OR1S2Q8NGQ3 325 aa17.25■□□□□ 0.35
USP39-203ENST00000409470 C17orf100A8MU93 164 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 FAM157CP0CG43 387 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 ZP3P21754 424 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 ASCL1P50553 236 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 CATR1Q13166 79 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 C5orf30Q96GV9 206 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 LINC00052Q96N35 136 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 SLC25A31Q9H0C2 315 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 WFDC1Q9HC57 220 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 GNG12Q9UBI6 72 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 CACNG5Q9UF02 275 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 PSG11Q9UQ72 335 aa17.24■□□□□ 0.35
USP39-203ENST00000409470 SHOXO15266 292 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 ST8SIA5O15466 376 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 CHST1O43916 411 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 PITX3O75364 302 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 IGKV1-5P01602 117 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 SELLP14151 372 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 LPAR6P43657 344 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 STUMQ69YW2 141 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 BTNL3Q6UXE8 466 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 LYRM2Q9NU23 88 aaPredicted RBP17.23■□□□□ 0.35
USP39-203ENST00000409470 OR6C3Q9NZP0 311 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 LPAR3Q9UBY5 353 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 IGSF23A1L1A6 192 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 MMP9P14780 707 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 TLE1Q04724 770 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 MSMO1Q15800 293 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 OR2B11Q5JQS5 317 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 Q6ZRM9 215 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 ZCCHC24Q8N2G6 241 aaKnown RBP17.23■□□□□ 0.35
USP39-203ENST00000409470 ST6GALNAC3Q8NDV1 305 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 TCTEX1D2Q8WW35 142 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 EDARADDQ8WWZ3 215 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 C14orf79Q96F83 325 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 SDSLQ96GA7 329 aa17.23■□□□□ 0.35
USP39-203ENST00000409470 SPTA1P02549 2419 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 LRRC30A6NM36 301 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 KRBOX1C9JBD0 128 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms