RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 PITX2Q99697 317 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MCHR1Q99705 422 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MACROD1Q9BQ69 325 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 TMEM133Q9H2Q1 129 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 OR52D1Q9H346 318 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 PRO1933Q9H354 126 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 CXorf21Q9HAI6 301 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 HEBP1Q9NRV9 189 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MMP17Q9ULZ9 603 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 HIGD1AQ9Y241 93 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 SNX11Q9Y5W9 270 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 COL4A6Q14031 1691 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 H7C1C5 153 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 SMIM22K7EJ46 135 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 GPANK1O95872 356 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 RCC1P18754 421 aaPredicted RBP4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MYL9P24844 172 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 ATP6V0CP27449 155 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 BACE1P56817 501 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 LCN6P62502 163 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 RIGQ13278 110 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MLANAQ16655 118 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 GLYATL3Q5SZD4 288 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 KDM4DQ6B0I6 523 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 RPL22L1Q6P5R6 122 aaKnown RBP4.68□□□□□ -1.66
CNGA1-202ENST00000402813 PPP1R27Q86WC6 154 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 KRTCAP2Q8N6L1 136 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 OR2G3Q8NGZ4 309 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 MBD3L1Q8WWY6 194 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 EEF1AKMT3Q96AZ1 226 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 TEX37Q96LM6 180 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 IP6K3Q96PC2 410 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 TMEM222Q9H0R3 208 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 C3orf14Q9HBI5 128 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 TPRKBQ9Y3C4 175 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 PLXNA3P51805 1871 aa4.68□□□□□ -1.66
CNGA1-202ENST00000402813 hADV38S2A0JD32 116 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 RAMP1O60894 148 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DHRS3O75911 302 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ALPLP05186 524 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 CSN2P05814 226 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZSCAN5DPP0CG00 497 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 HLA-EP13747 358 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PSG7Q13046 419 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 RNASE12Q5GAN4 147 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZNF684Q5T5D7 378 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PVRIGQ6DKI7 326 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 Q6ZVH6 145 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PIANPQ8IYJ0 282 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR4K5Q8NGD3 323 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ARPC1AQ92747 370 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 TMEM18Q96B42 140 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR2J1Q9GZK6 312 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 MRPL18Q9H0U6 180 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 R4GN57 208 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 A0A1W2PP18 115 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DHRS12A0PJE2 317 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 IRGMA1A4Y4 181 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 FAM106CPP0CH98 169 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 IGFBP6P24592 240 aaPredicted RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 KIR2DS2P43631 304 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 HERPUD1Q15011 391 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 FAM120AOSQ5T036 256 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 NCBP2-AS2Q69YL0 99 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 SLC22A18ASQ8N1D0 253 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR2G2Q8NGZ5 317 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 MFSD8Q8NHS3 518 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 GMPPAQ96IJ6 420 aaPredicted RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 SEC22AQ96IW7 307 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR52B2Q96RD2 323 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 RARRES2Q99969 163 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PBDC1Q9BVG4 233 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR2D2Q9H210 308 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 OR51I2Q9H344 312 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DUSP21Q9H596 190 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PRTFDC1Q9NRG1 225 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 KCNE5Q9UJ90 142 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZNF106Q9H2Y7 1883 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 SCN9AQ15858 1988 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DUXBA0A1W2PPF3 345 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 MYBPHLA2RUH7 354 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PHOX2AO14813 284 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 HLA-DQB2P05538 268 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 LGALS1P09382 135 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PIPP12273 146 aaPredicted RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PPIBP23284 216 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 PTGDSP41222 190 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DEFA1P59665 94 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 DEFA3P59666 94 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 RBM39Q14498 530 aaKnown RBP4.67□□□□□ -1.66
CNGA1-202ENST00000402813 ZNF404Q494X3 552 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 TECRLQ5HYJ1 363 aa4.67□□□□□ -1.66
CNGA1-202ENST00000402813 C19orf48Q6RUI8 117 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms