RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 EGR1P18146 543 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 LINC00205P59089 165 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 EIF3IQ13347 325 aaKnown RBP11.7□□□□□ -0.54
COL6A2-203ENST00000397763 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 OR10J5Q8NHC4 309 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 NDUFAF3Q9BU61 184 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 MRPL37Q9BZE1 423 aaKnown RBP11.7□□□□□ -0.54
COL6A2-203ENST00000397763 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CD33P20138 364 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 COL8A2P25067 703 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 NUTF2P61970 127 aaKnown RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 PMP22Q01453 160 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 NCR3LG1Q68D85 454 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 SAP25Q8TEE9 199 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 A0A1B0GUS0 222 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 TOX3O15405 576 aaPredicted RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 DFFBO76075 338 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CA6P23280 308 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CXCL12P48061 93 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 ZFP36L1Q07352 338 aaKnown RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 TMPRSS7Q7RTY8 843 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 OR4C12Q96R67 309 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 PRDM6Q9NQX0 595 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 IL17BQ9UHF5 180 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 TP53TG5Q9Y2B4 290 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 A6NNC1 897 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
COL6A2-203ENST00000397763 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
COL6A2-203ENST00000397763 MED13Q9UHV7 2174 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 IL18BPO95998 194 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 FGF12P61328 243 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 FOXO1Q12778 655 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 IL24Q13007 206 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 LPAL2Q16609 132 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 PLPPR2Q96GM1 343 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 C12orf49Q9H741 205 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 IL36GQ9NZH8 169 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 H7BYZ3 331 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 SYNGR2O43760 224 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 OPN1MWP04001 364 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 OPN1MW2P0DN77 364 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 OPN1MW3P0DN78 364 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 COX5BP10606 129 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 PAX5Q02548 391 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 LYSMD4Q5XG99 296 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF808Q8N4W9 903 aaPredicted RBP11.68□□□□□ -0.54
COL6A2-203ENST00000397763 LHX4Q969G2 390 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 OR5B12Q96R08 314 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 NEU1Q99519 415 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 KIAA1549Q9HCM3 1950 aa11.68□□□□□ -0.54
COL6A2-203ENST00000397763 MAP1LC3B2A6NCE7 125 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 GJE1A6NN92 205 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 GALR1P47211 349 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 GNB2P62879 340 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 TMEM68Q96MH6 324 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 SF3B5Q9BWJ5 86 aaKnown RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 MAP1LC3BQ9GZQ8 125 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF705FA8MVS1 300 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 CLDN1O95832 211 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 KRASP01116 189 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 GZMHP20718 246 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 FOLR3P41439 243 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 PCBD1P61457 104 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 CST9LP1Q5W188 147 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 C1QTNF5Q9BXJ0 243 aa11.67□□□□□ -0.54
COL6A2-203ENST00000397763 MRPS17Q9Y2R5 130 aaKnown RBP11.67□□□□□ -0.54
COL6A2-203ENST00000397763 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 H0Y980 276 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 DVL1O14640 695 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 SRD5A2P31213 254 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 WNT5AP41221 380 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 BAXQ07812 192 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF324BQ6AW86 544 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-203ENST00000397763 SPEM1Q8N4L4 309 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF525Q8N782 197 aa11.66□□□□□ -0.54
COL6A2-203ENST00000397763 OR2Y1Q8NGV0 311 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms