RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 GMPPAQ96IJ6 420 aaPredicted RBP8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 UFC1Q9Y3C8 167 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 PAPPA2Q9BXP8 1791 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 ZP4Q12836 540 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 SLC23A3Q6PIS1 610 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 MUC15Q8N387 334 aa8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 MRPS18BQ9Y676 258 aaKnown RBP8.95□□□□□ -0.98
LIMCH1-203ENST00000396595 SEC16AO15027 2179 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 LIMS1P48059 325 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 LHFPL4Q7Z7J7 247 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 JKAMPQ9P055 326 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 TRBV5-5A0A0J9YX44 114 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 F12P00748 615 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 IGHV3-7P01780 117 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 OR4A8P0C604 315 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 RCC1P18754 421 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 MPLP40238 635 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 CLDN18P56856 261 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ROM1Q03395 351 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 GUCA2BQ16661 112 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ZNF660Q6AZW8 331 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 TEPPQ6URK8 271 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 MEGF9Q9H1U4 602 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 RNF122Q9H9V4 155 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 KLHDC2Q9Y2U9 406 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 SPCS1Q9Y6A9 102 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 COL18A1P39060 1754 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 PPIHO43447 177 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 LIPFP07098 398 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 RPL30P62888 115 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ZNF502Q8TBZ5 544 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ABHD14AQ9BUJ0 271 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 C1QTNF9BB2RNN3 333 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ZNF205O95201 554 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ZNF841Q6ZN19 808 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 ABHD3Q8WU67 409 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 OR2V2Q96R30 315 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 TMEM204Q9BSN7 226 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 K7EQS6 105 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 FCGR3AP08637 254 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 MEF2CQ06413 473 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
LIMCH1-203ENST00000396595 A0A0U1RQV5 110 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 ASAH2BP0C7U1 165 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 PSG2P11465 335 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 C10orf113Q5VZT2 155 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 PUSL1Q8N0Z8 303 aaKnown RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 NFAM1Q8NET5 270 aaPredicted RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 OR4X1Q8NH49 305 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 ZPLD1Q8TCW7 415 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 RAB1CQ92928 201 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 PARLQ9H300 379 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 CENPVL1A0A0U1RR11 272 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 MOSPD3O75425 235 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 NGFRP08138 427 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 ZFP36L2P47974 494 aaKnown RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TMEM95Q3KNT9 176 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 CDX2Q99626 313 aaPredicted RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 F11RQ9Y624 299 aaKnown RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 KLK10O43240 276 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 MDKP21741 143 aaPredicted RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 SMAGPQ0VAQ4 97 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 DEFB123Q8N688 67 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 CT55Q8WUE5 264 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 ABHD14BQ96IU4 210 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TXNDC17Q9BRA2 123 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 MIEN1Q9BRT3 115 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TUBD1Q9UJT1 453 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TCFL5Q9UL49 500 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 DSPPQ9NZW4 1301 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 ERVH48-1M5A8F1 160 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 EML2O95834 649 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 MNX1P50219 401 aaPredicted RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 C9orf40Q8IXQ3 194 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TMEM252Q8N6L7 170 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 CYB561D1Q8N8Q1 229 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 TMEM52Q8NDY8 209 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 OR10W1Q8NGF6 305 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 OR1L8Q8NGR8 309 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 UCN2Q96RP3 112 aa8.93□□□□□ -0.98
LIMCH1-203ENST00000396595 SYNGR1O43759 233 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 RNASE1P07998 156 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 PEBP1P30086 187 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 SPINK14Q6IE38 97 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 BHLHA15Q7RTS1 189 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 RNF7Q9UBF6 113 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 GPR132Q9UNW8 380 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 LOC390937A0A1W2PQ73 354 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 FOXS1O43638 330 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 MT-ND6P03923 174 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 CCL3P10147 92 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 FOLR2P14207 255 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 LIFP15018 202 aa8.92□□□□□ -0.98
LIMCH1-203ENST00000396595 SRSF5Q13243 272 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms