RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TMEM128Q5BJH2 165 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SSNA1O43805 119 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 FCN3O75636 299 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 LOXL3P58215 753 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 MSMO1Q15800 293 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 MORN2Q502X0 79 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SLC25A42Q86VD7 318 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 UBALD1Q8TB05 177 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SECTM1Q8WVN6 248 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SLC5A7Q9GZV3 580 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 DSCAML1Q8TD84 2053 aa11.27□□□□□ -0.6
VAPB-202ENST00000395802 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.6
VAPB-202ENST00000395802 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.6
VAPB-202ENST00000395802 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 M0R1W7 72 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 GPR31O00270 319 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
VAPB-202ENST00000395802 ANXA3P12429 323 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 OMGP23515 440 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 NFYBP25208 207 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 LMO4P61968 165 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 DHRS2Q13268 280 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 LTC4SQ16873 150 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 C1orf122Q6ZSJ8 110 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 RSRP1Q9BUV0 290 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 C5orf66Q9H5L9 145 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.61
VAPB-202ENST00000395802 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 IGHV4-30-2A0A087WSY4 118 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 NBPF19A0A087WUL8 3843 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
VAPB-202ENST00000395802 AKR1C4P17516 323 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 USF1P22415 310 aaPredicted RBP11.26□□□□□ -0.61
VAPB-202ENST00000395802 PPP1CCP36873 323 aaKnown RBP11.26□□□□□ -0.61
VAPB-202ENST00000395802 BAMBIQ13145 260 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 ZNF431Q8TF32 576 aaPredicted RBP11.26□□□□□ -0.61
VAPB-202ENST00000395802 FXYD6Q9H0Q3 95 aa11.26□□□□□ -0.61
VAPB-202ENST00000395802 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
VAPB-202ENST00000395802 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 B3GALNT1O75752 331 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 OR8U9P0C7N5 309 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 CCL3L1P16619 93 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 GNRHRP30968 328 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 PIGPP57054 158 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 C5orf24Q7Z6I8 188 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 ZNF645Q8N7E2 425 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 C8orf31Q8N9H6 132 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 ADAD2Q8NCV1 583 aaKnown RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 OR8U1Q8NH10 309 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 TNFRSF14Q92956 283 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 RTBDNQ9BSG5 229 aaPredicted RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 SESN1Q9Y6P5 492 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 FBN2P35556 2912 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 A0A087X0M5 115 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 A0A1B0GX30 115 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 HLA-AP01891 365 aaKnown RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 RND3P61587 244 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 PPP1R1AQ13522 171 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 ZFP69Q49AA0 526 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 DRAXINQ8NBI3 349 aaPredicted RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 BVESQ8NE79 360 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 RTN4IP1Q8WWV3 396 aaPredicted RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 TMEM230Q96A57 120 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 METTL8Q9H825 291 aaKnown RBP11.25□□□□□ -0.61
VAPB-202ENST00000395802 PIPOXQ9P0Z9 390 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 KPTNQ9Y664 436 aa11.25□□□□□ -0.61
VAPB-202ENST00000395802 IGHV4-61A0A0C4DH41 118 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 C22orf46C9J442 243 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 DLX6P56179 175 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 DHODHQ02127 395 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 GNMTQ14749 295 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 Q5PR19 223 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 LYG2Q86SG7 212 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 OR2D2Q9H210 308 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms