RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 EGR1P18146 543 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 NFYBP25208 207 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 IL2RGP31785 369 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 HMGN3Q15651 99 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 FIP1L1Q6UN15 594 aaKnown RBP13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 MOB1BQ7L9L4 216 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 SVBPQ8N300 66 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 MBD3L2Q8NHZ7 208 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 OR2D2Q9H210 308 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 PLEKHF2Q9H8W4 249 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 TREM2Q9NZC2 230 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 TMEM30CPA0ZSE6 113 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 RAMP3O60896 148 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 IGHV3-13P01766 116 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 IGHV3-7P01780 117 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 HBZP02008 142 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 DANCRP0C864 163 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 PPT1P50897 306 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 PAX9P55771 341 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 Q6ZS92 163 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 AKR1E2Q96JD6 320 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 SH3BGRL2Q9UJC5 107 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 RNF115Q9Y4L5 304 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 SEC11BP0C7V7 166 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 KITLGP21583 273 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 RTP5Q14D33 572 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 P2RY6Q15077 328 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 OR13A1Q8NGR1 328 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 SNIP1Q8TAD8 396 aaKnown RBP13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 C5orf30Q96GV9 206 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 GPR37O15354 613 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 BMP5P22003 454 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 FAM27E3Q08E93 113 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 KRBOX4Q5JUW0 171 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 ETV3LQ6ZN32 361 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 CD177Q8N6Q3 437 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 OR2G3Q8NGZ4 309 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 GALMQ96C23 342 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 C19orf12Q9NSK7 152 aa13.41□□□□□ -0.26
CNKSR1-202ENST00000374253 CLEC18AA5D8T8 446 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 NPIPB11E5RHQ5 1161 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF816Q0VGE8 651 aaPredicted RBP13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 CLEC18CQ8NCF0 446 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 PKDREJQ9NTG1 2253 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 TOR1AO14656 332 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 SPRY3O43610 288 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 AKR1C3P42330 323 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 SHEQ5VZ18 495 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 IGFL3Q6UXB1 125 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 ABHD14BQ96IU4 210 aa13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 EIF5A2Q9GZV4 153 aaKnown RBP13.4□□□□□ -0.26
CNKSR1-202ENST00000374253 DUXBA0A1W2PPF3 345 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 TXNL1O43396 289 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 HNF4GQ14541 408 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 SLC25A31Q9H0C2 315 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 KIAA1324LA8MWY0 1029 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 PITX3O75364 302 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 KRASP01116 189 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 CD5P06127 495 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 MBNL2Q5VZF2 373 aaKnown RBP13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 IL22RA2Q969J5 263 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 FBXO7Q9Y3I1 522 aa13.39□□□□□ -0.27
CNKSR1-202ENST00000374253 TRIM77I1YAP6 450 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 LMO1P25800 156 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 SNCAP37840 140 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 SMIM21Q3B7S5 101 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 C1orf185Q5T7R7 199 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 MOGAT3Q86VF5 341 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 SEC11CQ9BY50 192 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 WASF3Q9UPY6 502 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 CARHSP1Q9Y2V2 147 aaKnown RBP13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 SPTA1P02549 2419 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 ZZEF1O43149 2961 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 G6PCP35575 357 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 CCL20P78556 96 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 ZNF266Q14584 549 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 C10orf91Q5T1B1 145 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 NINJ1Q92982 152 aa13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 RBMXL1Q96E39 390 aaKnown RBP13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 LIN7CQ9NUP9 197 aaKnown RBP13.38□□□□□ -0.27
CNKSR1-202ENST00000374253 A0A1B0GU03 582 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 OOEPA6NGQ2 149 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 C1QTNF9BB2RNN3 333 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 FAM157AC9JC47 383 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms