RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-202ENST00000360093 LURAP1Q96LR2 239 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 LPAR5Q9H1C0 372 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 KCNK7Q9Y2U2 307 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 C7orf66A4D0T2 115 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 TM4SF5O14894 197 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 KLF4O43474 513 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 FOXH1O75593 365 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 ADAP1O75689 374 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 G0S2P27469 103 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 ID1P41134 155 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 UCP3P55916 312 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 TPPP2P59282 170 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 RPEL1Q2QD12 228 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 MOGAT2Q3SYC2 334 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 RNF212Q495C1 297 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 C10orf113Q5VZT2 155 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 MYPOPQ86VE0 399 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-202ENST00000360093 MMD2Q8IY49 270 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 OR10A7Q8NGE5 316 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 FAM57AQ8TBR7 257 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 SLC2A8Q9NY64 477 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 KLK13Q9UKR3 277 aa4.2□□□□□ -1.74
SCN3A-202ENST00000360093 TCF20Q9UGU0 1960 aaKnown RBP4.2□□□□□ -1.74
SCN3A-202ENST00000360093 A0A1W2PPQ1 181 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF729A6NN14 1252 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 MUC1P15941 1255 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF708P17019 499 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 MMDQ15546 238 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TGIF1Q15583 401 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 LINC00114Q6XXX2 140 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF788Q6ZQV5 615 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 FA2HQ7L5A8 372 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 MS4A7Q9GZW8 240 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 WNT5BQ9H1J7 359 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ASCL3Q9NQ33 180 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 G6PC2Q9NQR9 355 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 IDI2-AS1Q9NZ38 188 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 HEATR1Q9H583 2144 aaKnown RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 PSG2P11465 335 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 PDLIM4P50479 330 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 GFRA1P56159 465 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 EGR4Q05215 589 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 CLRN3Q8NCR9 226 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 KCNK15Q9H427 330 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 PARP11Q9NR21 331 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 IL17BQ9UHF5 180 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 A0A1W2PS18 150 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 IGSF23A1L1A6 192 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 HLA-DQB1P01920 261 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 FAM87AP0C7U9 286 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 EWSR1Q01844 656 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SNAI3Q3KNW1 292 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SLC35E4Q6ICL7 350 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 STPG3Q8N7X2 389 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM105Q8N8V8 129 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM186Q96B77 213 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TREM2Q9NZC2 230 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TRAPPC1Q9Y5R8 145 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 IGHV3OR15-7A0A075B7D8 119 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ODAMA1E959 279 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 PLA2G10O15496 165 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF79Q15937 498 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ANKRD55Q3KP44 614 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 C4orf17Q53FE4 359 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SEC11CQ9BY50 192 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM222Q9H0R3 208 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 GBF1Q92538 1859 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TRAV30A0A087WSZ9 112 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 CTXND1A0A1B0GTU2 59 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 NTN3O00634 580 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 GATCO43716 136 aaKnown RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ADAD2Q8NCV1 583 aaKnown RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SLC24A4Q8NFF2 622 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ITLN1Q8WWA0 313 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 VSIG4Q9Y279 399 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SPTA1P02549 2419 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 TICRRQ7Z2Z1 1910 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ZIC3O60481 467 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 HSBP1O75506 76 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 G6PCP35575 357 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SUMO1P63165 101 aaKnown RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 Q96M66 194 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 PCGF1Q9BSM1 259 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SLC25A22Q9H936 323 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SIRT4Q9Y6E7 314 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 LIPFP07098 398 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 CTSBP07858 339 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 HTR1DP28221 377 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 RAB9AP51151 201 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 EFNB2P52799 333 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 OR8I2Q8N0Y5 310 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 LSM10Q969L4 123 aaKnown RBP4.19□□□□□ -1.74
SCN3A-202ENST00000360093 ST6GAL2Q96JF0 529 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 CCL13Q99616 98 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 SIRT7Q9NRC8 400 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 NLRC5Q86WI3 1866 aa4.19□□□□□ -1.74
SCN3A-202ENST00000360093 NKX2-6A6NCS4 301 aa4.18□□□□□ -1.74
SCN3A-202ENST00000360093 H0Y8G0 127 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms