RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PAFAH1B2P68402 229 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 CEACAM21Q3KPI0 293 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR4C12Q96R67 309 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 WDR54Q9H977 334 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 RBBP6Q7Z6E9 1792 aaKnown RBP13.52□□□□□ -0.25
TRAPPC11-202ENST00000357207 TRAV14DV4A0A0A6YYC5 116 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 IGHV5-10-1A0A0J9YXX1 117 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 NEURL1O76050 574 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 NDUFB4O95168 129 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 SUCLG1P53597 346 aaKnown RBP13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 RNF24Q9Y225 148 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 SCARF2Q96GP6 870 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 SEBOXQ9HB31 216 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A10PA6NDY2 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A18PA6NE21 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A16PA6NEW6 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A20PA6NIJ5 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A8PA6NJQ4 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 LRRC3CA6NJW4 275 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A7PA6NKC0 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A22PA8MWA6 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A12PA8MX19 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A5PA8MXJ8 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A23PA8MXZ1 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 DIRC3C9JPN6 131 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A15PP0C7V4 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A13PP0C7W8 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A14PP0C7W9 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A24PP0C7X0 464 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 MAGEA5P43359 124 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 GPR146Q96CH1 333 aa13.51□□□□□ -0.25
TRAPPC11-202ENST00000357207 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM87AP0C7U9 286 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TRGC1P0CF51 173 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 BRS3P32247 399 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 EFNB1P98172 346 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 AESQ08117 197 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TMEM187Q14656 261 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 C3AR1Q16581 482 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 HIKESHIQ53FT3 197 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 DHRS13Q6UX07 377 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 GGACTQ9BVM4 153 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 ELOVL1Q9BW60 279 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 ZNF236Q9UL36 1845 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 ANKRD36A6QL64 1941 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TGIF1Q15583 401 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TGIF2LXQ8IUE1 241 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 LRRC75AQ8NAA5 344 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 RHOVQ96L33 236 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 PGLYRP1O75594 196 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 COL5A1-AS1Q5SY13 56 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 SLC25A40Q8TBP6 338 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 CT55Q8WUE5 264 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 C17orf51A8MQB3 221 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 GAS1P54826 345 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 TREM2Q9NZC2 230 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 PRNDQ9UKY0 176 aa13.5□□□□□ -0.25
TRAPPC11-202ENST00000357207 MT-CO3P00414 261 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 GLIPR1P48060 266 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 SELENOHQ8IZQ5 122 aaKnown RBP13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 ABHD14AQ9BUJ0 271 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 NPVFQ9HCQ7 196 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 IL19Q9UHD0 177 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 MDC1Q14676 2089 aaKnown RBP13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 SYNGR1O43759 233 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 UCP3P55916 312 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 WDFY1Q8IWB7 410 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 NAGKQ9UJ70 344 aa13.49□□□□□ -0.25
TRAPPC11-202ENST00000357207 SHISA7A6NL88 538 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 IGKV3-11P04433 115 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 SNAI3Q3KNW1 292 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR2J1Q9GZK6 312 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 MPDU1O75352 247 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR2J3O76001 311 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 GAMTQ14353 236 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 LINC00114Q6XXX2 140 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 RPEQ96AT9 228 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 FSCN3Q9NQT6 498 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 GLRX2Q9NS18 164 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 R4GN57 208 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 IGHMP01871 453 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 S100A4P26447 101 aaKnown RBP13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 COL8A1P27658 744 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 MPLP40238 635 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 FGFRL1Q8N441 504 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 TMEM74BQ9NUR3 256 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms