RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IGKV1-39P01597 117 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 TFF1P04155 84 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 IGKV1D-39P04432 117 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 SPP1P10451 314 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 CD40P25942 277 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 LPAR6P43657 344 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 SWI5Q1ZZU3 235 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF585BQ52M93 769 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 BTNL8Q6UX41 500 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 GCSAMQ8N6F7 178 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 IGKV1D-17A0A075B6S4 117 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 MED19A0JLT2 244 aaPredicted RBP13.97□□□□□ -0.17
SAMM50-201ENST00000350028 TMEM218A2RU14 115 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 C16orf97H3BN30 126 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 SPINT2O43291 252 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 SPRY3O43610 288 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 CHST1O43916 411 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF16P17020 682 aaPredicted RBP13.97□□□□□ -0.17
SAMM50-201ENST00000350028 EPHA1P21709 976 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 GATA4P43694 442 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 BAXQ07812 192 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF266Q14584 549 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 SSX8Q7RTT4 187 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 MOGAT3Q86VF5 341 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 OR13A1Q8NGR1 328 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 ITLN1Q8WWA0 313 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 MRPL37Q9BZE1 423 aaKnown RBP13.97□□□□□ -0.17
SAMM50-201ENST00000350028 HRH4Q9H3N8 390 aa13.97□□□□□ -0.17
SAMM50-201ENST00000350028 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
SAMM50-201ENST00000350028 CHD3Q12873 2000 aaKnown RBP13.97□□□□□ -0.17
SAMM50-201ENST00000350028 MGST3O14880 152 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 LHBP01229 141 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 APOC3P02656 99 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 ADH4P08319 380 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 GZMHP20718 246 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 RAB5CP51148 216 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 HTD2P86397 168 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 NARS2Q96I59 477 aaKnown RBP13.96□□□□□ -0.17
SAMM50-201ENST00000350028 RAB40CQ96S21 281 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 OR2D2Q9H210 308 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 RNF115Q9Y4L5 304 aa13.96□□□□□ -0.17
SAMM50-201ENST00000350028 KIAA2026Q5HYC2 2103 aa13.96□□□□□ -0.18
SAMM50-201ENST00000350028 KIAA1324LA8MWY0 1029 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-201ENST00000350028 IGKV1-5P01602 117 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 DANCRP0C864 163 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 AKR1C2P52895 323 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 F2RL1P55085 397 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 RPL23AP62750 156 aaKnown RBP13.95□□□□□ -0.18
SAMM50-201ENST00000350028 CATR1Q13166 79 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 TMEM108Q6UXF1 575 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 Q6ZRG5 221 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 TCTEX1D1Q8N7M0 179 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 RNF150Q9ULK6 438 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
SAMM50-201ENST00000350028 BSNQ9UPA5 3926 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 ARID1AO14497 2285 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 C15orf65H3BRN8 121 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 TMEM50AO95807 157 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 TNFSF4P23510 183 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 PTAFRP25105 342 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 CCKARP32238 428 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 PAX9P55771 341 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 EIF4EBP1Q13541 118 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-201ENST00000350028 FAM209AQ5JX71 171 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 C22orf34Q6ZV56 151 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 TPRX1Q8N7U7 411 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 LYPD6BQ8NI32 183 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 FAM216AQ8WUB2 273 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 NCOR1P1Q9H4R4 102 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 JKAMPQ9P055 326 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 CACNG5Q9UF02 275 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 IL19Q9UHD0 177 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 PTPRQQ9UMZ3 2332 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 RAXQ9Y2V3 346 aa13.95□□□□□ -0.18
SAMM50-201ENST00000350028 ODAMA1E959 279 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 ABCD4O14678 606 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 ATG12O94817 140 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 PPP1CCP36873 323 aaKnown RBP13.94□□□□□ -0.18
SAMM50-201ENST00000350028 TNFAIP6P98066 277 aaPredicted RBP13.94□□□□□ -0.18
SAMM50-201ENST00000350028 RBPJQ06330 500 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 EDDM3AQ14507 147 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 SPRNQ5BIV9 151 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 Q6ZRM9 215 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 SPAG16Q8N0X2 631 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 SNRNP40Q96DI7 357 aaKnown RBP13.94□□□□□ -0.18
SAMM50-201ENST00000350028 RNF7Q9UBF6 113 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 CACFD1Q9UGQ2 172 aa13.94□□□□□ -0.18
SAMM50-201ENST00000350028 IGHV1-46P01743 117 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 SSTR5P35346 364 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 ZNF66Q6ZN08 573 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 ODF3L1Q8IXM7 274 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 COMMD1Q8N668 190 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 HSD17B11Q8NBQ5 300 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 FAM222BQ8WU58 562 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 MS4A7Q9GZW8 240 aaPredicted RBP13.93□□□□□ -0.18
SAMM50-201ENST00000350028 TREM1Q9NP99 234 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 COA4Q9NYJ1 87 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms