RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CNTFRP26992 372 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 OR3A3P47888 321 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 KRTAP10-11P60412 298 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 IZUMO2Q6UXV1 221 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 OR6M1Q8NGM8 313 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 KCNG3Q8TAE7 436 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 CHPT1Q8WUD6 406 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 YPEL2Q96QA6 119 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 MGLLQ99685 303 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 NABP2Q9BQ15 211 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 IFI27L2Q9H2X8 130 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 JPT1Q9UK76 154 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
BRCC3-202ENST00000340647 CD33P20138 364 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 IL3RAP26951 378 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 BLVRBP30043 206 aaPredicted RBP13.38□□□□□ -0.27
BRCC3-202ENST00000340647 THBS3P49746 956 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 CLDN12P56749 244 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 MRPL41Q8IXM3 137 aaKnown RBP13.38□□□□□ -0.27
BRCC3-202ENST00000340647 NEDD4LQ96PU5 975 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 ABHD14AQ9BUJ0 271 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 MRPL20Q9BYC9 149 aaKnown RBP13.38□□□□□ -0.27
BRCC3-202ENST00000340647 NECAP2Q9NVZ3 263 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
BRCC3-202ENST00000340647 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 TXNL1O43396 289 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 PROP1O75360 226 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 SNRPBP14678 240 aaKnown RBP13.37□□□□□ -0.27
BRCC3-202ENST00000340647 PLAC9Q5JTB6 97 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 OR51D1Q8NGF3 324 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 P2RX4Q99571 388 aa13.37□□□□□ -0.27
BRCC3-202ENST00000340647 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
BRCC3-202ENST00000340647 SAA2P0DJI9 122 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-202ENST00000340647 KHDC1LQ5JSQ8 128 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 GALMQ96C23 342 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 CNBD2Q96M20 576 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 AGMATQ9BSE5 352 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 CCDC90BQ9GZT6 254 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 KCNIP1Q9NZI2 227 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 ZNF107Q9UII5 783 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-202ENST00000340647 KCNK7Q9Y2U2 307 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 RYR3Q15413 4870 aa13.36□□□□□ -0.27
BRCC3-202ENST00000340647 IGKV1-6A0A0C4DH72 117 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 AP4M1O00189 453 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 ST8SIA5O15466 376 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 PF4P02776 101 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 ARSBP15848 533 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 CALRP27797 417 aaKnown RBP13.35□□□□□ -0.27
BRCC3-202ENST00000340647 KIAA0141Q14154 515 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-202ENST00000340647 TRAM1Q15629 374 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-202ENST00000340647 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 NR2C2APQ86WQ0 139 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 FOXRED2Q8IWF2 684 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 OR8H1Q8NGG4 311 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 ARHGAP5-AS1Q96IT6 56 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 ACOT13Q9NPJ3 140 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 ZFP57Q9NU63 452 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 HSF4Q9ULV5 492 aa13.35□□□□□ -0.27
BRCC3-202ENST00000340647 TMEM272A0A1B0GTI8 110 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 K7EIL1 84 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 IGF1P05019 195 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 SCTP09683 121 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 CT45A6P0DMU7 189 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 CT45A5P0DMU8 189 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 CT45A7P0DMV0 189 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
BRCC3-202ENST00000340647 VEGFCP49767 419 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 OR10A3P58181 314 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 ACTBP60709 375 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 EGFEM1PQ0D2K5 195 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 MOGAT2Q3SYC2 334 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 RPL39P5Q59GN2 51 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 REC114Q7Z4M0 266 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 RAX2Q96IS3 184 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 PECRQ9BY49 303 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 OR1A1Q9P1Q5 309 aa13.34□□□□□ -0.27
BRCC3-202ENST00000340647 PSMA1P25786 263 aaKnown RBP13.33□□□□□ -0.28
BRCC3-202ENST00000340647 PPIFP30405 207 aaKnown RBP13.33□□□□□ -0.28
BRCC3-202ENST00000340647 LINC00205P59089 165 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 RAB11BQ15907 218 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 PNLIPRP3Q17RR3 467 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 COMMD1Q8N668 190 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 KLHL30-AS1Q8NEE0 82 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 MRAPQ8TCY5 172 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 IL1F10Q8WWZ1 152 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms