RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 BTBD17A6NE02 478 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 RBBP9O75884 186 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 GAPDHP04406 335 aaKnown RBP9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 OR3A3P47888 321 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 RAB7AP51149 207 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ZNF134P52741 427 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ARPC4P59998 168 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 IL18Q14116 193 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 GNMTQ14749 295 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 AANATQ16613 207 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 IGSF11Q5DX21 431 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 UTF1Q5T230 341 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 TPTE2P1Q5T6R2 138 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 FAM53AQ6NSI3 398 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 CCDC144NLQ6NUI1 221 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 GVQW1Q8N7I0 195 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ZNF439Q8NDP4 499 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 GPX8Q8TED1 209 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 SSMEM1Q8WWF3 244 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 RPEQ96AT9 228 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 AJUBAQ96IF1 538 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ABHD1Q96SE0 405 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 CABLES2Q9BTV7 478 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 ABCB10Q9NRK6 738 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 OR1A1Q9P1Q5 309 aa9.65□□□□□ -0.86
SPTLC1-202ENST00000337841 KIAA2026Q5HYC2 2103 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 MEIS3P1A6NDR6 274 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 LY6LH3BQJ8 138 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 FCER2P06734 321 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 BRS3P32247 399 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 HILS1P60008 231 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 FAM131AQ6UXB0 335 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 LDLRAD3Q86YD5 345 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 LYG1Q8N1E2 194 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 OR5AP2Q8NGF4 316 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 OR5R1Q8NH85 324 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 TOMM40LQ969M1 308 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 SSX3Q99909 188 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 TOLLIPQ9H0E2 274 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 C11orf54Q9H0W9 315 aaPredicted RBP9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 NECAP2Q9NVZ3 263 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 PIPOXQ9P0Z9 390 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF221Q9UK13 617 aa9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 RBM7Q9Y580 266 aaKnown RBP9.64□□□□□ -0.87
SPTLC1-202ENST00000337841 GABARAPH6UMI1 98 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 TRIM77I1YAP6 450 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 RAB29O14966 203 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 CTDSPLO15194 276 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 SLC31A2O15432 143 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 HOXA3O43365 443 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 NAT1P18440 290 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 PTBP1P26599 531 aaKnown RBP eCLIP9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 RCVRNP35243 200 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 IER3P46695 156 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 TAS2R46P59540 309 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 HERPUD1Q15011 391 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 LRRC75BQ2VPJ9 315 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 SPANXN2Q5MJ10 180 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 OR8H3Q8N146 312 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 OR6Q1Q8NGQ2 317 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 OR52I2Q8NH67 350 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 GCDHQ92947 438 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 S1PR3Q99500 378 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 SOSTQ9BQB4 213 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNRD1Q9P1U0 126 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
SPTLC1-202ENST00000337841 VGLL3A8MV65 326 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 CLDN34H7C241 214 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ST8SIA5O15466 376 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 TXNL1O43396 289 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 LANCL1O43813 399 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 OR8U9P0C7N5 309 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 OR5H8P0DN80 308 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 DYNLT3P51808 116 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ACTBP60709 375 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ACTG1P63261 375 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 SSBP1Q04837 148 aaKnown RBP9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF816Q0VGE8 651 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 CDK10Q15131 360 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 CNPY1Q3B7I2 92 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 PLA1AQ53H76 456 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 TGIF2LXQ8IUE1 241 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 LYSMD2Q8IV50 215 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 H1FOOQ8IZA3 346 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 DYNAPQ8N1N2 210 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ZDHHC22Q8N966 263 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms