RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ANGPTL4Q9BY76 406 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 TAAR3PQ9P1P4 343 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 LIAT1Q6ZQX7 453 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 Q8IYB0 196 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 MANBALQ9NQG1 85 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 OCIAD1Q9NX40 245 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 POLEQ07864 2286 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 IGHV4-34P06331 123 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 USF1P22415 310 aaPredicted RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 STUMQ69YW2 141 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 MRGPRGQ86SM5 289 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 MRPL30Q8TCC3 161 aaKnown RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 ANAPC16Q96DE5 110 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 RSG1Q9BU20 258 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 VAX1Q5SQQ9 334 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 OR2Y1Q8NGV0 311 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 ZNF430Q9H8G1 570 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-201ENST00000337331 DEFB108AA8MXU0 73 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 PRR32B1ATL7 298 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 PAFAH1B2P68402 229 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 TMEM252Q8N6L7 170 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 GPR27Q9NS67 375 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 PPIAL4AQ9Y536 164 aa13.96□□□□□ -0.17
NPHP3-201ENST00000337331 TRBV6-7A0A0A0MS04 114 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF17P17021 662 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 SUCLG1P53597 346 aaKnown RBP13.96□□□□□ -0.18
NPHP3-201ENST00000337331 RIPPLY3P57055 190 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 SLC38A11Q08AI6 406 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 C1orf185Q5T7R7 199 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 OR52M1Q8NGK5 317 aa13.96□□□□□ -0.18
NPHP3-201ENST00000337331 SPRY3O43610 288 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 GYPAP02724 150 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 DNLZQ5SXM8 178 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 LINC01590Q5TEZ4 76 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 NUDT10Q8NFP7 164 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
NPHP3-201ENST00000337331 BOD1Q96IK1 185 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.95□□□□□ -0.18
NPHP3-201ENST00000337331 CCL3P10147 92 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 GNB1P62873 340 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 RNPS1Q15287 305 aaKnown RBP13.95□□□□□ -0.18
NPHP3-201ENST00000337331 LAMTOR2Q9Y2Q5 125 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 MED12Q93074 2177 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 ARID2Q68CP9 1835 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 K7EQM0 130 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
NPHP3-201ENST00000337331 CLEC2AQ6UVW9 174 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 MOB1BQ7L9L4 216 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 PSG11Q9UQ72 335 aa13.95□□□□□ -0.18
NPHP3-201ENST00000337331 GREB1LQ9C091 1923 aaPredicted RBP13.95□□□□□ -0.18
NPHP3-201ENST00000337331 SPINK14Q6IE38 97 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 HDHD3Q9BSH5 251 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-201ENST00000337331 FCGR3BO75015 233 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF721Q8TF20 911 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 PARLQ9H300 379 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF646O15015 1829 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-201ENST00000337331 LYZL6O75951 148 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 HLA-DRB5Q30154 266 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF506Q5JVG8 444 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 H1FOOQ8IZA3 346 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-201ENST00000337331 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-201ENST00000337331 CLDN16Q9Y5I7 305 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 VDAC1P21796 283 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 MPLP40238 635 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-201ENST00000337331 OR10S1Q8NGN2 331 aa13.94□□□□□ -0.18
NPHP3-201ENST00000337331 PPYP01298 95 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 IER3P46695 156 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 SSPNQ14714 243 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 Q56UQ5 140 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 FZR1Q9UM11 496 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 MPDZO75970 2070 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 TRGV10A0A0A0MS01 117 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 LRRC3CA6NJW4 275 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 DXOO77932 396 aaKnown RBP13.93□□□□□ -0.18
NPHP3-201ENST00000337331 MEOX1P50221 254 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 UNQ5815/PRO19632Q6UWF5 114 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 SMIM12Q96EX1 92 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 ABCA1O95477 2261 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 TRAV17A0A0B4J275 112 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 OR5B21A6NL26 309 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 IFITM10A6NMD0 228 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 IGHV3-13P01766 116 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 IGHV3-7P01780 117 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF766Q5HY98 468 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 TBC1D26Q86UD7 250 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF385AQ96PM9 386 aaKnown RBP13.93□□□□□ -0.18
NPHP3-201ENST00000337331 MYLKQ15746 1914 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
NPHP3-201ENST00000337331 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 ADH4P08319 380 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 CT45A10P0DMU9 189 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 ICAM4Q14773 271 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms