RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TNXAQ16473 311 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 SNAI3Q3KNW1 292 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 Q5BKY6 102 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 OR1L8Q8NGR8 309 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 BLNKQ8WV28 456 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 RND1Q92730 232 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 OR10C1Q96KK4 312 aa14.78□□□□□ -0.04
TRAPPC11-201ENST00000334690 HPRT1P00492 218 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 RUNX1Q01196 453 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 OR1K1Q8NGR3 316 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 PSME4Q14997 1843 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 K7ESF4 209 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 TOX4O94842 621 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 CXorf1O96002 111 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 FCER1GP30273 86 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 HOXA6P31267 233 aa14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 PDCD11Q14690 1871 aaKnown RBP14.77□□□□□ -0.04
TRAPPC11-201ENST00000334690 C16orf97H3BN30 126 aa14.77□□□□□ -0.05
TRAPPC11-201ENST00000334690 CD8AP01732 235 aa14.77□□□□□ -0.05
TRAPPC11-201ENST00000334690 KHDC1LQ5JSQ8 128 aa14.77□□□□□ -0.05
TRAPPC11-201ENST00000334690 ASCL5Q7RTU5 278 aa14.77□□□□□ -0.05
TRAPPC11-201ENST00000334690 SNX22Q96L94 193 aa14.77□□□□□ -0.05
TRAPPC11-201ENST00000334690 RNASEKQ6P5S7 137 aaKnown RBP14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 SSX7Q7RTT5 188 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 ZNF71Q9NQZ8 489 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 TMEM74BQ9NUR3 256 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 SPAARA0A1B0GVQ0 90 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 MPDU1O75352 247 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 VAMP3Q15836 100 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 C1QTNF12Q5T7M4 302 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 CLN8Q9UBY8 286 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 PITPNC1Q9UKF7 332 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 J3QR06 171 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 RAB29O14966 203 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 HKR1P10072 659 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 UCP3P55916 312 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 MS4A3Q96HJ5 214 aa14.76□□□□□ -0.05
TRAPPC11-201ENST00000334690 GREB1Q4ZG55 1949 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 TGFBR3LH3BV60 316 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 ZNF253O75346 499 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 HBZP02008 142 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 HTR1DP28221 377 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 CD1BP29016 333 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 CYB561D1Q8N8Q1 229 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 OR52L2PQ8NGH6 319 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 NPVFQ9HCQ7 196 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 OR2H2O95918 312 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 F12P00748 615 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 FAM157CP0CG43 387 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 CAMPP49913 170 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 CXorf66Q5JRM2 361 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 GDF15Q99988 308 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 TXNDC17Q9BRA2 123 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 C17orf51A8MQB3 221 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 AHRRA9YTQ3 701 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 RPS11P62280 158 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 COL10A1Q03692 680 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 ZNF880Q6PDB4 577 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 DLL3Q9NYJ7 618 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 PRR33A8MZF0 331 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 FAM90A26D6RGX4 464 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 C1QL1O75973 258 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 HSPB1P04792 205 aaKnown RBP14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 MELTFP08582 738 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 LYZP61626 148 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 RPL31P62899 125 aaKnown RBP14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 IL22RA2Q969J5 263 aa14.75□□□□□ -0.05
TRAPPC11-201ENST00000334690 HELTA6NFD8 242 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 ZNF98A6NK75 572 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 CLDN14O95500 239 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 PRSS3P2Q8NHM4 247 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 WNT5BQ9H1J7 359 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 PTBP3O95758 552 aaKnown RBP14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 HOXD4P09016 255 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 MPV17P39210 176 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 PACRGQ96M98 296 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 INSIG2Q9Y5U4 225 aa14.74□□□□□ -0.05
TRAPPC11-201ENST00000334690 PGLYRP1O75594 196 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 EFEMP2O95967 443 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 BMI1P35226 326 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 SPNS3Q6ZMD2 512 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 LRRC75AQ8NAA5 344 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 OR1B1Q8NGR6 318 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 RHOVQ96L33 236 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 PRO1933Q9H354 126 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 C1RLQ9NZP8 487 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 TIAF1O95411 115 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 ZNF362Q5T0B9 420 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 NCOR1O75376 2440 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 OR4A8P0C604 315 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 SMIM17P0DL12 118 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 RPL29P47914 159 aaKnown RBP14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 CD81P60033 236 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 TMEM204Q9BSN7 226 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 HEXA-AS1Q9H8Q6 139 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 KIF26BQ2KJY2 2108 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 BRS3P32247 399 aa14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 MEF2BQ02080 365 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC11-201ENST00000334690 RSG1Q9BU20 258 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms