RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 LURAP1Q96LR2 239 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 GCM1Q9NP62 436 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 RAB18Q9NP72 206 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 PLEKHJ1Q9NW61 149 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF581Q9P0T4 197 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF230Q9UIE0 474 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-202ENST00000324340 ANAPC10Q9UM13 185 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 TRBV23-1A0A0A0MS06 115 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 FAM221AA4D161 298 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 A6NNC1 897 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 SRRM5B3KS81 715 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 TSTD3H0UI37 97 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 HS3ST1O14792 307 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 OR7C1O76099 320 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-202ENST00000324340 NXPH2O95156 264 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 PGAM2P15259 253 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 NQO2P16083 231 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 PPOXP50336 477 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 Q6P435 159 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 MEX3BQ6ZN04 569 aaKnown RBP10.71□□□□□ -0.69
DDX39A-202ENST00000324340 ACP7Q6ZNF0 438 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 MOGAT3Q86VF5 341 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A1Q86YD7 464 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 GCSAMQ8N6F7 178 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 BEND2Q8NDZ0 799 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 OR5R1Q8NH85 324 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 LRRC29Q8WV35 223 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 TMED6Q8WW62 240 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 DCUN1D4Q92564 292 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 NEU1Q99519 415 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 SPACA1Q9HBV2 294 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 DYNLRB1Q9NP97 96 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 RPS10P5Q9NQ39 176 aa10.71□□□□□ -0.69
DDX39A-202ENST00000324340 CHD3Q12873 2000 aaKnown RBP10.71□□□□□ -0.7
DDX39A-202ENST00000324340 RAI1Q7Z5J4 1906 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-202ENST00000324340 A0A1W2PPE3 182 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 A0A1W2PPR1 153 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-202ENST00000324340 DANCRP0C864 163 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 GLRA1P23415 457 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 LMO1P25800 156 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 DHRS11Q6UWP2 260 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 TRAPPC6BQ86SZ2 158 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 DTX2Q86UW9 622 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 ARRDC1Q8N5I2 433 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 CYYR1Q96J86 154 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 NOL4LQ96MY1 436 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-202ENST00000324340 SCGB3A2Q96PL1 93 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 SSX3Q99909 188 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 RNF126Q9BV68 326 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 UNKLQ9H9P5 680 aaKnown RBP10.7□□□□□ -0.7
DDX39A-202ENST00000324340 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 CBY1Q9Y3M2 126 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 PLCE1Q9P212 2302 aa10.7□□□□□ -0.7
DDX39A-202ENST00000324340 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
DDX39A-202ENST00000324340 A0A087WWC5 75 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 CXorf65A6NEN9 183 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 CEACAM18A8MTB9 384 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 WNT9BO14905 357 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 F12P00748 615 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-202ENST00000324340 KNG1P01042 644 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 EGR1P18146 543 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 DDTP30046 118 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 SNU13P55769 128 aaKnown RBP10.69□□□□□ -0.7
DDX39A-202ENST00000324340 IL13RA1P78552 427 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 CCL8P80075 99 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 ARFRP1Q13795 201 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 PDCD1Q15116 288 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 RNASE10Q5GAN6 216 aaKnown RBP10.69□□□□□ -0.7
DDX39A-202ENST00000324340 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 C9orf152Q5JTZ5 239 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 TMED4Q7Z7H5 227 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
DDX39A-202ENST00000324340 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 OR11L1Q8NGX0 322 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 YPEL4Q96NS1 127 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 FAAP24Q9BTP7 215 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 PRDM13Q9H4Q3 707 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 SAP30LQ9HAJ7 183 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 DECR2Q9NUI1 292 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 RNF7Q9UBF6 113 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 AK3Q9UIJ7 227 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 PPP1R3CQ9UQK1 317 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 TANC2Q9HCD6 1990 aa10.69□□□□□ -0.7
DDX39A-202ENST00000324340 ANKHD1Q8IWZ3 2542 aaKnown RBP10.69□□□□□ -0.7
DDX39A-202ENST00000324340 TRAV24A0A0B4J272 114 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 IFNL4K9M1U5 179 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 SH2D1BO14796 132 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 DEGS1O15121 323 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 JTBO76095 146 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 OR2H2O95918 312 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 DUSP1P28562 367 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms